RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 RNF208Q9H0X6 261 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 BCAS3Q9H6U6 928 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 PAK6Q9NQU5 681 aaPredicted RBP17.77■□□□□ 0.44
SPG7-218ENST00000568205 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 CEP131Q9UPN4 1083 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 Q9Y3F1 56 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 CLIC4Q9Y696 253 aa17.77■□□□□ 0.44
SPG7-218ENST00000568205 LAD1O00515 517 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 SORBS3O60504 671 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 GAS7O60861 476 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 FARP2O94887 1054 aaPredicted RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 BAG4O95429 457 aaKnown RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 ATP2C1P98194 919 aaPredicted RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 DNM1Q05193 864 aaKnown RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 LAMC2Q13753 1193 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 LRCH2Q5VUJ6 765 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 ATL3Q6DD88 541 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 METTL7BQ6UX53 244 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 CYFIP1Q7L576 1253 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 TLK2Q86UE8 772 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 OR6J1Q8NGC5 347 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 EMID1Q96A84 441 aaPredicted RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 AP5M1Q9H0R1 490 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 MLXIPQ9HAP2 919 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 JPH1Q9HDC5 661 aaPredicted RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
SPG7-218ENST00000568205 TFIP11Q9UBB9 837 aaKnown RBP17.76■□□□□ 0.43
SPG7-218ENST00000568205 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
SPG7-218ENST00000568205 PSMD10O75832 226 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
SPG7-218ENST00000568205 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
SPG7-218ENST00000568205 PTPAQ15257 358 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 COL13A1Q5TAT6 717 aaPredicted RBP17.75■□□□□ 0.43
SPG7-218ENST00000568205 LHX8Q68G74 356 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 TEKT3Q9BXF9 490 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 UPF3AQ9H1J1 476 aaKnown RBP17.75■□□□□ 0.43
SPG7-218ENST00000568205 XPNPEP3Q9NQH7 507 aa17.75■□□□□ 0.43
SPG7-218ENST00000568205 SYNRGQ9UMZ2 1314 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 POTEFA5A3E0 1075 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 DDX39AO00148 427 aaKnown RBP17.74■□□□□ 0.43
SPG7-218ENST00000568205 PRPHP41219 470 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 TXKP42681 527 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 GJA9P57773 515 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 SPATA33Q96N06 139 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 SPC25Q9HBM1 224 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 SLC9A2Q9UBY0 812 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 TCEAL9Q9UHQ7 104 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 VAV3Q9UKW4 847 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 CFAP45Q9UL16 551 aa17.74■□□□□ 0.43
SPG7-218ENST00000568205 YEATS4O95619 227 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 CCNE2O96020 404 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 KRT85P78386 507 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 KRT76Q01546 638 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 SP4Q02446 784 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 SLC39A14Q15043 492 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 STK38Q15208 465 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
SPG7-218ENST00000568205 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
SPG7-218ENST00000568205 PCDHA12Q9UN75 941 aa17.73■□□□□ 0.43
SPG7-218ENST00000568205 MORC2Q9Y6X9 1032 aaPredicted RBP17.73■□□□□ 0.43
SPG7-218ENST00000568205 A6NJR5 290 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 NOP56O00567 594 aaKnown RBP17.72■□□□□ 0.43
SPG7-218ENST00000568205 CTAGE5O15320 804 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 ADAMTS4O75173 837 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 PGK1P00558 417 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 GJB1P08034 283 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
SPG7-218ENST00000568205 NCLP19338 710 aaKnown RBP17.72■□□□□ 0.43
SPG7-218ENST00000568205 ACTR2P61160 394 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 NKX3-2P78367 333 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 PPP2R5CQ13362 524 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 FSCN1Q16658 493 aaKnown RBP17.72■□□□□ 0.43
SPG7-218ENST00000568205 HSDL1Q3SXM5 330 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 ZNF746Q6NUN9 644 aaPredicted RBP17.72■□□□□ 0.43
SPG7-218ENST00000568205 B3GNT9Q6UX72 402 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 GPR20Q99678 358 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 UNC45AQ9H3U1 944 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 TELO2Q9Y4R8 837 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 KIAA1217Q5T5P2 1943 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 ELP1O95163 1332 aa17.72■□□□□ 0.43
SPG7-218ENST00000568205 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 CHMP2AO43633 222 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 MMP3P08254 477 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 CPT1AP50416 773 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
SPG7-218ENST00000568205 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
SPG7-218ENST00000568205 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 BRDTQ58F21 947 aaPredicted RBP17.71■□□□□ 0.43
SPG7-218ENST00000568205 DTHD1Q6ZMT9 781 aa17.71■□□□□ 0.43
SPG7-218ENST00000568205 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
SPG7-218ENST00000568205 U2AF1L4Q8WU68 220 aaKnown RBP17.71■□□□□ 0.43
SPG7-218ENST00000568205 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
SPG7-218ENST00000568205 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms