RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 TP53INP1Q96A56 240 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 CRELD1Q96HD1 420 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 TMEM87BQ96K49 555 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 LLPHQ9BRT6 129 aaKnown RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 MTA3Q9BTC8 594 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 MRIQ9BWK5 157 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 EPB41L4AQ9HCS5 686 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 INCENPQ9NQS7 918 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 TOMM22Q9NS69 142 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 NAP1L2Q9ULW6 460 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-218ENST00000568153 COL24A1Q17RW2 1714 aa7.18□□□□□ -1.26
CAPN3-218ENST00000568153 TUBGCP6Q96RT7 1819 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 MYH3P11055 1940 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 COL4A1P02462 1669 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 ERICH2A1L162 156 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 B4E1Z4 1266 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 GOLGA6L22H0YM25 854 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 IFIT3O14879 490 aaKnown RBP7.17□□□□□ -1.26
CAPN3-218ENST00000568153 PAGE1O75459 146 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 ZBTB7AO95365 584 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 DPEP1P16444 411 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 MAOBP27338 520 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 PPP2R3AQ06190 1150 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 SART3Q15020 963 aaKnown RBP7.17□□□□□ -1.26
CAPN3-218ENST00000568153 RRP12Q5JTH9 1297 aaKnown RBP7.17□□□□□ -1.26
CAPN3-218ENST00000568153 SYNE3Q6ZMZ3 975 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 CYB5R4Q7L1T6 521 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 TBC1D10CQ8IV04 446 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 AMOTL1Q8IY63 956 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 STK35Q8TDR2 534 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 IGDCC4Q8TDY8 1250 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 ESR2Q92731 530 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 CEP44Q9C0F1 390 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 MTFR1LQ9H019 292 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 VPS33BQ9H267 617 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-218ENST00000568153 PIM2Q9P1W9 311 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 ZDHHC9Q9Y397 364 aa7.17□□□□□ -1.26
CAPN3-218ENST00000568153 WDR33Q9C0J8 1336 aaKnown RBP7.17□□□□□ -1.26
CAPN3-218ENST00000568153 UNCXA6NJT0 531 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 STX6O43752 255 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 BAG4O95429 457 aaKnown RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 CYP11A1P05108 521 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 CELA3AP09093 270 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 FGRP09769 529 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 ZSCAN22P10073 491 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 SYT1P21579 422 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 KCNA3P22001 575 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 LIFRP42702 1097 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 NT5C2P49902 561 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 ANTXR2P58335 489 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 FKBP1AP62942 108 aaKnown RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 CCT2P78371 535 aaKnown RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 PDE4BQ07343 736 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 SCRN1Q12765 414 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 AP3B2Q13367 1082 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 POU4F3Q15319 338 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 SKOR2Q2VWA4 1001 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 TMEM67Q5HYA8 995 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 SOGA3Q5TF21 947 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 STRIP1Q5VSL9 837 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 HHIPL2Q6UWX4 724 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 STK11IPQ8N1F8 1099 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 SH3RF3Q8TEJ3 882 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 TGFBRAP1Q8WUH2 860 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 GTF3C6Q969F1 213 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 MCM9Q9NXL9 1143 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 ANGEL1Q9UNK9 670 aaKnown RBP7.16□□□□□ -1.26
CAPN3-218ENST00000568153 KIF3AQ9Y496 699 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 ATP6V1DQ9Y5K8 247 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 MROH7-TTC4A0A0A0MT08 1334 aa7.16□□□□□ -1.26
CAPN3-218ENST00000568153 C4AP0C0L4 1744 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 LAMB2P55268 1798 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 KLF18A0A0U1RQI7 1052 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 CCDC69A6NI79 296 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 F8W031 263 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 SH2B2O14492 632 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 ECE2O60344 883 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 RANBP6O60518 1105 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 BTDP43251 543 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 HMGN5P82970 282 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 KIAA2012Q0VF49 1180 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 PKP1Q13835 747 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 R3HDM1Q15032 1099 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 TAF1CQ15572 869 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 CCDC93Q567U6 631 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 CCDC178Q5BJE1 867 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 DALRD3Q5D0E6 543 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 C12orf60Q5U649 245 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 CPLX2Q6PUV4 134 aaKnown RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 PDZD3Q86UT5 571 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 SULF2Q8IWU5 870 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 TEX11Q8IYF3 940 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 ZNF444Q8N0Y2 327 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-218ENST00000568153 FAM184AQ8NB25 1140 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 PSMD1Q99460 953 aa7.15□□□□□ -1.26
CAPN3-218ENST00000568153 CORO1BQ9BR76 489 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms