RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 UBIAD1Q9Y5Z9 338 aa28.83■■■□□ 2.21
FANCA-228ENST00000567943 PRPF3O43395 683 aaKnown RBP28.82■■■□□ 2.2
FANCA-228ENST00000567943 SCG2P13521 617 aa28.82■■■□□ 2.2
FANCA-228ENST00000567943 AKAP17AQ02040 695 aaKnown RBP28.82■■■□□ 2.2
FANCA-228ENST00000567943 HERVK_113Q902F9 699 aa28.82■■■□□ 2.2
FANCA-228ENST00000567943 DHX38Q92620 1227 aaKnown RBP28.82■■■□□ 2.2
FANCA-228ENST00000567943 PGBD1Q96JS3 809 aa28.82■■■□□ 2.2
FANCA-228ENST00000567943 GPR20Q99678 358 aa28.82■■■□□ 2.2
FANCA-228ENST00000567943 KATNAL1Q9BW62 490 aa28.82■■■□□ 2.2
FANCA-228ENST00000567943 SMCO2A6NFE2 343 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 PITPNM1O00562 1244 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 LGALS2P05162 132 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 KCNA2P16389 499 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 IFNAR1P17181 557 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 CLK2P49760 499 aaKnown RBP28.81■■■□□ 2.2
FANCA-228ENST00000567943 ADCY7P51828 1080 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 STK3Q13188 491 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 C7orf31Q8N865 590 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 GPRASP2Q96D09 838 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 SLC26A6Q9BXS9 759 aa28.81■■■□□ 2.2
FANCA-228ENST00000567943 GBF1Q92538 1859 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 RBAK-RBAKDNI3L0D1 243 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 IQCF3P0C7M6 154 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 ZNF200P98182 395 aaPredicted RBP28.8■■■□□ 2.2
FANCA-228ENST00000567943 NLRX1Q86UT6 975 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 FAM161BQ96MY7 647 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 GUCD1Q96NT3 240 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 RNF26Q9BY78 433 aaPredicted RBP28.8■■■□□ 2.2
FANCA-228ENST00000567943 TTYH1Q9H313 450 aaPredicted RBP28.8■■■□□ 2.2
FANCA-228ENST00000567943 TMEM260Q9NX78 707 aa28.8■■■□□ 2.2
FANCA-228ENST00000567943 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.79■■■□□ 2.2
FANCA-228ENST00000567943 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.79■■■□□ 2.2
FANCA-228ENST00000567943 GRXCR1A8MXD5 290 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 FGBP02675 491 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 C8orf34Q49A92 452 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 OTOP2Q7RTS6 562 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 TEX2Q8IWB9 1127 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 CYP2W1Q8TAV3 490 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 WNT8BQ93098 351 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 IL17RAQ96F46 866 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 JADE2Q9NQC1 790 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 NOD1Q9Y239 953 aa28.79■■■□□ 2.2
FANCA-228ENST00000567943 H3BRB1 525 aa28.78■■■□□ 2.2
FANCA-228ENST00000567943 GPNMBQ14956 572 aa28.78■■■□□ 2.2
FANCA-228ENST00000567943 TUT1Q9H6E5 874 aaKnown RBP28.78■■■□□ 2.2
FANCA-228ENST00000567943 EHMT1Q9H9B1 1298 aa28.78■■■□□ 2.2
FANCA-228ENST00000567943 CHD7Q9P2D1 2997 aa28.78■■■□□ 2.2
FANCA-228ENST00000567943 NOP56O00567 594 aaKnown RBP28.77■■■□□ 2.2
FANCA-228ENST00000567943 CPLX1O14810 134 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 HOXC8P31273 242 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 BFSP2Q13515 415 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 MTMR1Q13613 665 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 DEFB128Q7Z7B8 93 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 TRIM50Q86XT4 487 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 RPUSD2Q8IZ73 545 aaKnown RBP28.77■■■□□ 2.2
FANCA-228ENST00000567943 ANO3Q9BYT9 981 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 GLT8D2Q9H1C3 349 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 SEMA6BQ9H3T3 888 aa28.77■■■□□ 2.2
FANCA-228ENST00000567943 FOSP01100 380 aaPredicted RBP28.76■■■□□ 2.19
FANCA-228ENST00000567943 SP4Q02446 784 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 RBL2Q08999 1139 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 TRIM71Q2Q1W2 868 aaKnown RBP28.76■■■□□ 2.19
FANCA-228ENST00000567943 ZNF697Q5TEC3 545 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 CAGE1Q8TC20 777 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 CCDC12Q8WUD4 166 aaPredicted RBP28.76■■■□□ 2.19
FANCA-228ENST00000567943 ZMYND12Q9H0C1 365 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 PKD2L1Q9P0L9 805 aa28.76■■■□□ 2.19
FANCA-228ENST00000567943 SREBF1P36956 1147 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 PBX2P40425 430 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 AK2P54819 239 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 SSRP1Q08945 709 aaKnown RBP28.75■■■□□ 2.19
FANCA-228ENST00000567943 TRIM22Q8IYM9 498 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 RETREG2Q8NC44 543 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 GIMAP8Q8ND71 665 aaPredicted RBP28.75■■■□□ 2.19
FANCA-228ENST00000567943 CDHR1Q96JP9 859 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 MXRA8Q9BRK3 442 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 KCNH7Q9NS40 1196 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 TPCN1Q9ULQ1 816 aa28.75■■■□□ 2.19
FANCA-228ENST00000567943 PRUNE2Q8WUY3 3088 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 ESYT2A0FGR8 921 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 DNAJB2P25686 324 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 AP3B2Q13367 1082 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 ANKRD1Q15327 319 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 CPLX2Q6PUV4 134 aaKnown RBP28.74■■■□□ 2.19
FANCA-228ENST00000567943 TRAF7Q6Q0C0 670 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 AFAP1L1Q8TED9 768 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 CRYGNQ8WXF5 182 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 PBX4Q9BYU1 374 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 SLKQ9H2G2 1235 aaPredicted RBP28.74■■■□□ 2.19
FANCA-228ENST00000567943 C6orf50Q9HD87 102 aa28.74■■■□□ 2.19
FANCA-228ENST00000567943 GSTTP1A0A1W2PQM5 241 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 MAFGO15525 162 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 SMIM10L2AP0DMW4 78 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 SMIM10L2BP0DMW5 78 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 CKBP12277 381 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 RFC2P35250 354 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 PTK7Q13308 1070 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 UTP14CQ5TAP6 766 aaKnown RBP28.73■■■□□ 2.19
FANCA-228ENST00000567943 JAKMIP3Q5VZ66 844 aa28.73■■■□□ 2.19
FANCA-228ENST00000567943 RNPEPQ9H4A4 650 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms