RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 KAT2BQ92831 832 aa24.66■■□□□ 1.54
NME3-210ENST00000567271 LLPHQ9BRT6 129 aaKnown RBP24.66■■□□□ 1.54
NME3-210ENST00000567271 PRDM5Q9NQX1 630 aaPredicted RBP24.66■■□□□ 1.54
NME3-210ENST00000567271 PRKAG2Q9UGJ0 569 aa24.66■■□□□ 1.54
NME3-210ENST00000567271 TRIM43BA6NCK2 446 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 FAM86B1E9PN63 330 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 FAM86B2P0C5J1 330 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 ARP10275 920 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 TRIM43Q96BQ3 446 aaPredicted RBP24.65■■□□□ 1.54
NME3-210ENST00000567271 GPR20Q99678 358 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 PKD2L1Q9P0L9 805 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 SCN10AQ9Y5Y9 1956 aa24.65■■□□□ 1.54
NME3-210ENST00000567271 NOP56O00567 594 aaKnown RBP24.64■■□□□ 1.54
NME3-210ENST00000567271 CD4P01730 458 aa24.64■■□□□ 1.54
NME3-210ENST00000567271 TMEM39AQ9NV64 488 aa24.64■■□□□ 1.54
NME3-210ENST00000567271 PCDH10Q9P2E7 1040 aa24.64■■□□□ 1.54
NME3-210ENST00000567271 TELO2Q9Y4R8 837 aa24.64■■□□□ 1.54
NME3-210ENST00000567271 IGLV3-22A0A075B6J6 115 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 KIAA0355O15063 1070 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 TLR3O15455 904 aaKnown RBP24.63■■□□□ 1.53
NME3-210ENST00000567271 EDIL3O43854 480 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 F2P00734 622 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 ZNF286BP0CG31 522 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 CIITAP33076 1130 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 NFRKBQ6P4R8 1299 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 CHRDL2Q6WN34 429 aa24.63■■□□□ 1.53
NME3-210ENST00000567271 AGO4Q9HCK5 861 aaKnown RBP24.63■■□□□ 1.53
NME3-210ENST00000567271 HAS3O00219 553 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 CD2BP2O95400 341 aaKnown RBP24.62■■□□□ 1.53
NME3-210ENST00000567271 MAGEA10P43363 369 aaPredicted RBP24.62■■□□□ 1.53
NME3-210ENST00000567271 USP11P51784 963 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 PTPN11Q06124 597 aaPredicted RBP24.62■■□□□ 1.53
NME3-210ENST00000567271 PLA2G4DQ86XP0 818 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 TBCKQ8TEA7 893 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 PPP1R13LQ8WUF5 828 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 GDF15Q99988 308 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 C16orf70Q9BSU1 422 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 TRPV6Q9H1D0 765 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 TBX21Q9UL17 535 aa24.62■■□□□ 1.53
NME3-210ENST00000567271 NFASCO94856 1347 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 PSEN2P49810 448 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 CHMP4BP1P59074 171 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 SP4Q02446 784 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 ITGB3BPQ13352 177 aaPredicted RBP24.61■■□□□ 1.53
NME3-210ENST00000567271 FAM47CQ5HY64 1035 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 KRT25Q7Z3Z0 450 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 OXER1Q8TDS5 423 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 KATNAL1Q9BW62 490 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 PRO3102Q9H379 93 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 COLQQ9Y215 455 aaPredicted RBP24.61■■□□□ 1.53
NME3-210ENST00000567271 DOCK5Q9H7D0 1870 aa24.61■■□□□ 1.53
NME3-210ENST00000567271 B4GALT4O60513 344 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 LGALS2P05162 132 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 ITGB8P26012 769 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 MCM2P49736 904 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 MFSD10Q14728 455 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 NONOQ15233 471 aaKnown RBP eCLIP24.6■■□□□ 1.53
NME3-210ENST00000567271 SDF4Q9BRK5 362 aa24.6■■□□□ 1.53
NME3-210ENST00000567271 JPH1Q9HDC5 661 aaPredicted RBP24.6■■□□□ 1.53
NME3-210ENST00000567271 GSTTP1A0A1W2PQM5 241 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 MDM2Q00987 491 aaPredicted RBP24.59■■□□□ 1.53
NME3-210ENST00000567271 SETQ01105 290 aaPredicted RBP24.59■■□□□ 1.53
NME3-210ENST00000567271 KIAA0753Q2KHM9 967 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 PRR16Q569H4 304 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 SESTD1Q86VW0 696 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 SEPT1Q8WYJ6 367 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 TMX3Q96JJ7 454 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 LBHD1Q9BQE6 289 aaPredicted RBP24.59■■□□□ 1.53
NME3-210ENST00000567271 TRMT13Q9NUP7 481 aaKnown RBP24.59■■□□□ 1.53
NME3-210ENST00000567271 SLC9A2Q9UBY0 812 aa24.59■■□□□ 1.53
NME3-210ENST00000567271 H3BRB1 525 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 SUPT20HL2P0C7V6 817 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 RAG1P15918 1043 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 BMP8BP34820 402 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 TCF7P36402 384 aaPredicted RBP24.58■■□□□ 1.53
NME3-210ENST00000567271 HMGN5P82970 282 aaKnown RBP24.58■■□□□ 1.53
NME3-210ENST00000567271 TRIM29Q14134 588 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 KRT40Q6A162 431 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 LENG9Q96B70 501 aa24.58■■□□□ 1.53
NME3-210ENST00000567271 TUT1Q9H6E5 874 aaKnown RBP24.58■■□□□ 1.53
NME3-210ENST00000567271 RANBP2P49792 3224 aaKnown RBP24.58■■□□□ 1.53
NME3-210ENST00000567271 CYP3A7-CYP3A51PA0A087WV96 503 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 CCDC194A0A1B0GVG4 234 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 IPO5O00410 1097 aaKnown RBP24.57■■□□□ 1.52
NME3-210ENST00000567271 DHX15O43143 795 aaKnown RBP24.57■■□□□ 1.52
NME3-210ENST00000567271 TIMP1P01033 207 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 MMP1P03956 469 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 CYP3A7P24462 503 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 KRT2P35908 639 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 INF2Q27J81 1249 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 UTP14CQ5TAP6 766 aaKnown RBP24.57■■□□□ 1.52
NME3-210ENST00000567271 C7orf31Q8N865 590 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 BADQ92934 168 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 ZNF577Q9BSK1 485 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 BRMS1Q9HCU9 246 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 HDAC6Q9UBN7 1215 aa24.57■■□□□ 1.52
NME3-210ENST00000567271 FOSBP53539 338 aa24.56■■□□□ 1.52
NME3-210ENST00000567271 NR5A1Q13285 461 aa24.56■■□□□ 1.52
NME3-210ENST00000567271 TNFRSF25Q93038 417 aa24.56■■□□□ 1.52
NME3-210ENST00000567271 GTF2IRD1Q9UHL9 959 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms