RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 HAS1Q92839 578 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 JMJD4Q9H9V9 463 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 EPB41L5Q9HCM4 733 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 LUC7LQ9NQ29 371 aaKnown RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 NFU1Q9UMS0 254 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 TNRC6CQ9HCJ0 1690 aaKnown RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 hCG_1984214I3L0E3 225 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 RGL2O15211 777 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 TLR2O60603 784 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 NOL4O94818 638 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 KCTD1Q719H9 257 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 ZNF572Q7Z3I7 529 aaPredicted RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 RNF10Q8N5U6 811 aaKnown RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 ZNF713Q8N859 430 aaPredicted RBP15.7■□□□□ 0.1
CDH1-209ENST00000566510 CUL5Q93034 780 aa15.7■□□□□ 0.1
CDH1-209ENST00000566510 GOLGB1Q14789 3259 aaKnown RBP15.69■□□□□ 0.1
CDH1-209ENST00000566510 NRAPQ86VF7 1730 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 GOLGA8KD6RF30 607 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 GLI1P08151 1106 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 KLRC1P26715 233 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 GNGT1P63211 74 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 KLHL30Q0D2K2 578 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 EMBQ6PCB8 327 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 BCAS4Q8TDM0 211 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 PSTPIP2Q9H939 334 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
CDH1-209ENST00000566510 HEXIM1O94992 359 aaKnown RBP15.69■□□□□ 0.1
CDH1-209ENST00000566510 KRT14P02533 472 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 CARSP49589 748 aaKnown RBP15.69■□□□□ 0.1
CDH1-209ENST00000566510 GUCY2FP51841 1108 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 MRPL12P52815 198 aaKnown RBP15.69■□□□□ 0.1
CDH1-209ENST00000566510 GTF2IP78347 998 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 PTPROQ16827 1216 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 GPBP1Q86WP2 473 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 CCDC65Q8IXS2 484 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
CDH1-209ENST00000566510 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 A0A087X0T9 212 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 POTEB3A0JP26 581 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 POTECB2RU33 542 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 FAM228BP0C875 321 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 MAGEA9P43362 315 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 ADAM9Q13443 819 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 PPP4R3AQ6IN85 833 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 POTEBQ6S5H4 581 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 KRT12Q99456 494 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 PACSIN1Q9BY11 444 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 NUCKS1Q9H1E3 243 aaKnown RBP15.68■□□□□ 0.1
CDH1-209ENST00000566510 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L15C9J2P7 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L10C9JJH3 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L13C9JLJ4 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L11C9JVI0 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L18D6R9N7 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L22D6RA61 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L17D6RBQ6 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L19D6RCP7 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L20D6RJB6 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 TTLL1O95922 423 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 PLA2G4BP0C869 781 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 ATP1A2P50993 1020 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L24Q0WX57 530 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
CDH1-209ENST00000566510 EDEM3Q9BZQ6 932 aa15.68■□□□□ 0.1
CDH1-209ENST00000566510 FAM153BP0C7A2 387 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 ATP2B4P23634 1241 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 CORO7P57737 925 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 FAM153CQ494X1 144 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 ZCWPW2Q504Y3 356 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 SH2D3CQ8N5H7 860 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 C8orf37Q96NL8 207 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 ZIM3Q96PE6 472 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 EMILIN3Q9NT22 766 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 FAM153AQ9UHL3 310 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 SHOX2O60902 331 aaPredicted RBP15.67■□□□□ 0.1
CDH1-209ENST00000566510 IL1R1P14778 569 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 STAT3P40763 770 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 ZNF543Q08ER8 600 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 NAB2Q15742 525 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 SLC18A3Q16572 532 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 TTMPQ5BVD1 217 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 ALS2CLQ60I27 953 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 RUBCNQ92622 972 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
CDH1-209ENST00000566510 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
CDH1-209ENST00000566510 EBAG9O00559 213 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms