RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CAP2P40123 477 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 WHAMMP3Q1A5X7 153 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 EDRF1Q3B7T1 1238 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CACNA2D4Q7Z3S7 1137 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 KCNK18Q7Z418 384 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 MCF2L2Q86YR7 1114 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 SPICE1Q8N0Z3 855 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 SAMD3Q8N6K7 520 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 GPR161Q8N6U8 529 aaKnown RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 SYT2Q8N9I0 419 aaPredicted RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 KIFC2Q96AC6 838 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CCDC42Q96M95 316 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 WDR24Q96S15 920 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 EIF3CQ99613 913 aaKnown RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 DEF6Q9H4E7 631 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 ZHX3Q9H4I2 956 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 OGFRQ9NZT2 677 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CDC23Q9UJX2 597 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CTDP1Q9Y5B0 961 aaPredicted RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CNTNAP1P78357 1384 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 TADA3O75528 432 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 TUBBP07437 444 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 CYP11B2P19099 503 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 RPL13P26373 211 aaKnown RBP14.8□□□□□ -0.04
LINC00563-201ENST00000566370 MIIPQ5JXC2 388 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 ACRBPQ8NEB7 543 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 NEK9Q8TD19 979 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 MMRN2Q9H8L6 949 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
LINC00563-201ENST00000566370 LOXHD1Q8IVV2 1947 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 A0A1W2PRG0 241 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 MED24O75448 989 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 EYA4O95677 639 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 BMS1Q14692 1282 aaKnown RBP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 SHROOM1Q2M3G4 852 aaPredicted RBP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 ERCC6LQ2NKX8 1250 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 CCDC174Q6PII3 467 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 TMCO3Q6UWJ1 677 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 SRGAP1Q7Z6B7 1085 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 LPAR1Q92633 364 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 RABGGTAQ92696 567 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 JAKMIP2Q96AA8 810 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 TTYH3Q9C0H2 523 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 TAOK3Q9H2K8 898 aa14.79□□□□□ -0.04
LINC00563-201ENST00000566370 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 V9GYY5 206 aaPredicted RBP14.79□□□□□ -0.04
LINC00563-201ENST00000566370 FRMD3A2A2Y4 597 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 MSH4O15457 936 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 POTEIP0CG38 1075 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 FDX1P10109 184 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 HNRNPH3P31942 346 aaKnown RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 SLC12A3P55017 1021 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 MARSP56192 900 aaKnown RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 SNAP25P60880 206 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 DALRD3Q5D0E6 543 aaKnown RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 CCDC122Q5T0U0 273 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 LRCH2Q5VUJ6 765 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 POTEGQ6S5H5 508 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 POTEEQ6S8J3 1075 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 LRRC55Q6ZSA7 311 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 CATSPER3Q86XQ3 398 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 SLC35F6Q8N357 371 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 HPS3Q969F9 1004 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 NHEJ1Q9H9Q4 299 aaPredicted RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 MAP3K20Q9NYL2 800 aaKnown RBP14.78□□□□□ -0.04
LINC00563-201ENST00000566370 KCND2Q9NZV8 630 aa14.78□□□□□ -0.04
LINC00563-201ENST00000566370 UBE4BO95155 1302 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 FAM86B1E9PN63 330 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 ATP8B1O43520 1251 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 GAS7O60861 476 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 FAM86B2P0C5J1 330 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 STAT3P40763 770 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 ECE1P42892 770 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 PRELPP51888 382 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 CHMP4BP1P59074 171 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.04
LINC00563-201ENST00000566370 SPIRE1Q08AE8 756 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 LRRC41Q15345 812 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 ECM1Q16610 540 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 ZCWPW2Q504Y3 356 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 TEX35Q5T0J7 233 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 IQCEQ6IPM2 695 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 ACER1Q8TDN7 264 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 EIF2AK1Q9BQI3 630 aaKnown RBP14.77□□□□□ -0.04
LINC00563-201ENST00000566370 METTL14Q9HCE5 456 aaKnown RBP14.77□□□□□ -0.04
LINC00563-201ENST00000566370 MYOZ2Q9NPC6 264 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 CEP72Q9P209 647 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 SEL1LQ9UBV2 794 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 TCEAL9Q9UHQ7 104 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 GUCA1BQ9UMX6 200 aa14.77□□□□□ -0.04
LINC00563-201ENST00000566370 PLAGL2Q9UPG8 496 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms