RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 KCNQ4P56696 695 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 ARL8AQ96BM9 186 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 DYNLL2Q96FJ2 89 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 PBKQ96KB5 322 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 INPP4AQ96PE3 977 aaPredicted RBP23.78■■□□□ 1.4
SPSB3-208ENST00000566339 EPN3Q9H201 632 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 STK32BQ9NY57 414 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 STX8Q9UNK0 236 aa23.78■■□□□ 1.4
SPSB3-208ENST00000566339 BZW2Q9Y6E2 419 aaKnown RBP23.78■■□□□ 1.4
SPSB3-208ENST00000566339 HEXIM1O94992 359 aaKnown RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 PLCG2P16885 1265 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 SLC1A4P43007 532 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 SLC7A5Q01650 507 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 GFPT1Q06210 699 aaPredicted RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 CUL1Q13616 776 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 TDRD12Q587J7 1177 aaKnown RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 FAM83BQ5T0W9 1011 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 CALR3Q96L12 384 aaKnown RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 DRC1Q96MC2 740 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 PDGFDQ9GZP0 370 aaPredicted RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 NT5C3AQ9H0P0 336 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 BMP2KQ9NSY1 1161 aaPredicted RBP23.77■■□□□ 1.4
SPSB3-208ENST00000566339 SALL4Q9UJQ4 1053 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 TMEM59LQ9UK28 342 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 SNED1Q8TER0 1413 aa23.77■■□□□ 1.4
SPSB3-208ENST00000566339 PLIN4Q96Q06 1357 aa23.77■■□□□ 1.39
SPSB3-208ENST00000566339 NDUFAB1O14561 156 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 KIAA0754O94854 1291 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 FSBPO95073 299 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 GCFC2P16383 781 aaKnown RBP23.76■■□□□ 1.39
SPSB3-208ENST00000566339 TXKP42681 527 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 DRP2Q13474 957 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 MCTP2Q6DN12 878 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 CNPY4Q8N129 248 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 SH3RF3Q8TEJ3 882 aaPredicted RBP23.76■■□□□ 1.39
SPSB3-208ENST00000566339 TFCP2L1Q9NZI6 479 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 LY75O60449 1722 aa23.76■■□□□ 1.39
SPSB3-208ENST00000566339 RPS6KA4O75676 772 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 MATR3P43243 847 aaKnown RBP eCLIP23.75■■□□□ 1.39
SPSB3-208ENST00000566339 DDX12PQ92771 950 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 ZFP91Q96JP5 570 aaPredicted RBP23.75■■□□□ 1.39
SPSB3-208ENST00000566339 ATP6V1G3Q96LB4 118 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 CCDC43Q96MW1 224 aaKnown RBP23.75■■□□□ 1.39
SPSB3-208ENST00000566339 EYA3Q99504 573 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 PLEKHA4Q9H4M7 779 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 BHMG1C9JSJ3 638 aaPredicted RBP23.75■■□□□ 1.39
SPSB3-208ENST00000566339 ADCY7P51828 1080 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 PLCB4Q15147 1175 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 CCDC40Q4G0X9 1142 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 ASPRV1Q53RT3 343 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 TRIM59Q8IWR1 403 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 ISCUQ9H1K1 167 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 EPB41L5Q9HCM4 733 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 PLCB1Q9NQ66 1216 aa23.75■■□□□ 1.39
SPSB3-208ENST00000566339 MEFVO15553 781 aaPredicted RBP23.74■■□□□ 1.39
SPSB3-208ENST00000566339 PALMO75781 387 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 NOL4O94818 638 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 GLI1P08151 1106 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 TM4SF1P30408 202 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 EDRF1Q3B7T1 1238 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 SNX29Q8TEQ0 813 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 TAF4BQ92750 862 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 LRRC45Q96CN5 670 aa23.74■■□□□ 1.39
SPSB3-208ENST00000566339 NCK2O43639 380 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 PPP1R37O75864 691 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 CDK8P49336 464 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 CARSP49589 748 aaKnown RBP23.73■■□□□ 1.39
SPSB3-208ENST00000566339 NAP1L1P55209 391 aaKnown RBP23.73■■□□□ 1.39
SPSB3-208ENST00000566339 COASYQ13057 564 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 FAM26FQ5R3K3 315 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 CCDC65Q8IXS2 484 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 USP38Q8NB14 1042 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 DNAJC19Q96DA6 116 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 EEF2KMTQ96G04 330 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 TANGO6Q9C0B7 1094 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 TAF1DQ9H5J8 278 aaPredicted RBP23.73■■□□□ 1.39
SPSB3-208ENST00000566339 ZNF233A6NK53 670 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
SPSB3-208ENST00000566339 NR1D1P20393 614 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 CXCR5P32302 372 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 LSP1P33241 339 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 GUCY2DQ02846 1103 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 SLC27A3Q5K4L6 730 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 PRPF38AQ8NAV1 312 aaKnown RBP23.73■■□□□ 1.39
SPSB3-208ENST00000566339 ACTRT1Q8TDG2 376 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 HPS3Q969F9 1004 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 NFU1Q9UMS0 254 aa23.73■■□□□ 1.39
SPSB3-208ENST00000566339 CCDC188H7C350 402 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 TLR2O60603 784 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 BIRC3Q13489 604 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 ASIC2Q16515 512 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.72■■□□□ 1.39
SPSB3-208ENST00000566339 OTUD6BQ8N6M0 293 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 PIK3R5Q8WYR1 880 aa23.72■■□□□ 1.39
SPSB3-208ENST00000566339 LSM14BQ9BX40 385 aaKnown RBP23.72■■□□□ 1.39
SPSB3-208ENST00000566339 GOLGA6L10A6NI86 522 aa23.71■■□□□ 1.39
SPSB3-208ENST00000566339 BUB1O43683 1085 aa23.71■■□□□ 1.39
SPSB3-208ENST00000566339 MDH1P40925 334 aaKnown RBP23.71■■□□□ 1.39
SPSB3-208ENST00000566339 MTMR3Q13615 1198 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms