RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 C1orf162Q8NEQ5 155 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 PIWIL2Q8TC59 973 aaKnown RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 FBXO41Q8TF61 875 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 ERCC4Q92889 916 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 TP53INP1Q96A56 240 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 SYTL4Q96C24 671 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 CLIP3Q96DZ5 547 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 MMP19Q99542 508 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 ELF4Q99607 663 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 OSBPL1AQ9BXW6 950 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 RHOBTB2Q9BYZ6 727 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 CELF4Q9BZC1 486 aaKnown RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 PCIF1Q9H4Z3 704 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 C7orf69Q9H7B7 122 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 ARNT2Q9HBZ2 717 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 TOPORSQ9NS56 1045 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 OBP2AQ9NY56 170 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 FBXL7Q9UJT9 491 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 ANKRD6Q9Y2G4 727 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 RAXQ9Y2V3 346 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 RWDD3Q9Y3V2 267 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 PCDHA11Q9Y5I1 949 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 NPFFR2Q9Y5X5 522 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 FRMPD2Q68DX3 1309 aaPredicted RBP2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 NISCHQ9Y2I1 1504 aa2.37□□□□□ -2.03
SUB1P4-201ENST00000566062 ERCC6L2Q5T890 1561 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 BICRAQ9NZM4 1560 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 A0A1W2PQJ5 194 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 KLHL33A6NCF5 533 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 C1QTNF9BB2RNN3 333 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 C22orf46C9J442 243 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 IGF2BP3O00425 579 aaKnown RBP eCLIP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 NKRFO15226 690 aaKnown RBP eCLIP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 FGF10O15520 208 aaPredicted RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 TGM5O43548 720 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 AP1G1O43747 822 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 PCDHGA12O60330 932 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 HIP1RO75146 1068 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 H2AFYO75367 372 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RFPL1O75677 317 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ABLIM3O94929 683 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 APOL3O95236 402 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CFBP00751 764 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 LTFP02788 710 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ITGB2P05107 769 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 F13BP05160 661 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 IFIT2P09913 472 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 H2AFB1P0C5Y9 115 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 H2AFB2P0C5Z0 115 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ZNF865P0CJ78 1059 aaPredicted RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 FPR2P25090 351 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 TACR1P25103 407 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CYP2C19P33261 490 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RECQLP46063 649 aaPredicted RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 GTF2A2P52657 109 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 OXCT1P55809 520 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RBM10P98175 930 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 SPIRE1Q08AE8 756 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 FZD5Q13467 585 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 LRRC32Q14392 662 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 GPR19Q15760 415 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 SLC14A2Q15849 920 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 NKPD1Q17RQ9 610 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RGL3Q3MIN7 710 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 MINDY4Q4G0A6 757 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 IFIT1BQ5T764 474 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ANGEL2Q5VTE6 544 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 HLA-DQA1Q5Y7H0 255 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CPZQ66K79 652 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CCSAPQ6IQ19 270 aaPredicted RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CXorf57Q6NSI4 855 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RNF111Q6ZNA4 994 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 Q6ZS46 218 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CD163Q86VB7 1156 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 SMC5Q8IY18 1101 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 DZIP1LQ8IYY4 767 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CBARPQ8N350 705 aaPredicted RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CPA6Q8N4T0 437 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 EFHBQ8N7U6 833 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 TMEM52Q8NDY8 209 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 PIP4K2CQ8TBX8 421 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 PANK1Q8TE04 598 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 DPF3Q92784 378 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RELTQ969Z4 430 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 HSPBAP1Q96EW2 488 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 SLC2A13Q96QE2 648 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ARPC5LQ9BPX5 153 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ORAI3Q9BRQ5 295 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 MENTQ9BUN1 341 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 BOCQ9BWV1 1114 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ANO3Q9BYT9 981 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CD244Q9BZW8 370 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 ATP13A1Q9HD20 1204 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 CHST12Q9NRB3 414 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 RIC8BQ9NVN3 520 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 DDX20Q9UHI6 824 aaKnown RBP2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 USP25Q9UHP3 1055 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 KCNG1Q9UIX4 513 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 EDARQ9UNE0 448 aa2.36□□□□□ -2.03
SUB1P4-201ENST00000566062 INVSQ9Y283 1065 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms