RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 LRSAM1Q6UWE0 723 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 USP49Q70CQ1 688 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 IQUBQ8NA54 791 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 IWS1Q96ST2 819 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 LRWD1Q9UFC0 647 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 UBIAD1Q9Y5Z9 338 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 MSH4O15457 936 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 CCND2P30279 289 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 FAM110CQ1W6H9 321 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 Q3C1V9 767 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 CNNM3Q8NE01 707 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 PAWRQ96IZ0 340 aaKnown RBP21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 PRO3102Q9H379 93 aa21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 PAK6Q9NQU5 681 aaPredicted RBP21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 ADD3Q9UEY8 706 aaKnown RBP21.48■■□□□ 1.03
CSPG4P13-201ENST00000565545 B4DLN1 442 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 EIF2AK2P19525 551 aaKnown RBP21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 LONRF3Q496Y0 759 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 CABP7Q86V35 215 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 VSIG10LQ86VR7 867 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 SLC5A5Q92911 643 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 JADE2Q9NQC1 790 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 LCTP09848 1927 aa21.47■■□□□ 1.03
CSPG4P13-201ENST00000565545 LOC102724159A0A0B4J2E5 919 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 POTEB2H3BUK9 544 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 MAFGO15525 162 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 NR3C2P08235 984 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 SLFN14P0C7P3 912 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 PWP2Q15269 919 aaKnown RBP21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 KRT79Q5XKE5 535 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 NECAB2Q7Z6G3 386 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 CEP57L1Q8IYX8 460 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 PDILTQ8N807 584 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 CYP2W1Q8TAV3 490 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 CALML4Q96GE6 196 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 MPHOSPH6Q99547 160 aaKnown RBP21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 CRISPLD2Q9H0B8 497 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 CUEDC2Q9H467 287 aa21.46■■□□□ 1.03
CSPG4P13-201ENST00000565545 ACTN4O43707 911 aaKnown RBP21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 PEX10O60683 326 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 KCTD2Q14681 263 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 E2F4Q16254 413 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 NLRX1Q86UT6 975 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 IL31RAQ8NI17 732 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 MMP19Q99542 508 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 RIT2Q99578 217 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 MAGEF1Q9HAY2 307 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 DISC1Q9NRI5 854 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 SERTAD1Q9UHV2 236 aa21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 ZNFX1Q9P2E3 1918 aaKnown RBP21.45■■□□□ 1.02
CSPG4P13-201ENST00000565545 A0A1W2PPC1 479 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 CCDC192P0DO97 292 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 FCER1AP12319 257 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 MYCLP12524 364 aaPredicted RBP21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 ITGB5P18084 799 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 RRAGBQ5VZM2 374 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 ABRAQ8N0Z2 381 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 RASSF8Q8NHQ8 419 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 ERMNQ8TAM6 284 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 DHX58Q96C10 678 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 GPRASP2Q96D09 838 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 ZNF577Q9BSK1 485 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
CSPG4P13-201ENST00000565545 A0A087X0B3 334 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 PP2D1A8MPX8 630 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 STRNO43815 780 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 PSMD10O75832 226 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 HMGCRP04035 888 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 STAT6P42226 847 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 LRCH2Q5VUJ6 765 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 SASS6Q6UVJ0 657 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 CKAP2LQ8IYA6 745 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 CDHR1Q96JP9 859 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 PURBQ96QR8 312 aaKnown RBP21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 MMTAG2Q9BU76 263 aaKnown RBP21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 TSPY26PQ9H489 355 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 HMX1Q9NP08 348 aaPredicted RBP21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 KCNH7Q9NS40 1196 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 KIAA1468Q9P260 1216 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 KDM3AQ9Y4C1 1321 aa21.43■■□□□ 1.02
CSPG4P13-201ENST00000565545 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 POTEMA6NI47 508 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 MGAMO43451 1857 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 GAS7O60861 476 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 ARP10275 920 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 CDC25AP30304 524 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 ALDH5A1P51649 535 aaPredicted RBP21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 SPIRE1Q08AE8 756 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 PPP2R5CQ13362 524 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 MTMR1Q13613 665 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 KARSQ15046 597 aaKnown RBP21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 STXBP2Q15833 593 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 HYIQ5T013 277 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 HAUS3Q68CZ6 603 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 SH3RF1Q7Z6J0 888 aa21.42■■□□□ 1.02
CSPG4P13-201ENST00000565545 KCTD17Q8N5Z5 321 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms