RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ZBTB43O43298 467 aa18■□□□□ 0.47
CDH3-204ENST00000565453 BAIAP3O94812 1187 aa18■□□□□ 0.47
CDH3-204ENST00000565453 PARNO95453 639 aaKnown RBP18■□□□□ 0.47
CDH3-204ENST00000565453 ADGRE1Q14246 886 aa18■□□□□ 0.47
CDH3-204ENST00000565453 RTN1Q16799 776 aa18■□□□□ 0.47
CDH3-204ENST00000565453 TCTN1Q2MV58 587 aa18■□□□□ 0.47
CDH3-204ENST00000565453 WWC2Q6AWC2 1192 aa18■□□□□ 0.47
CDH3-204ENST00000565453 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
CDH3-204ENST00000565453 HEATR3Q7Z4Q2 680 aa18■□□□□ 0.47
CDH3-204ENST00000565453 NLRX1Q86UT6 975 aa18■□□□□ 0.47
CDH3-204ENST00000565453 USP38Q8NB14 1042 aa18■□□□□ 0.47
CDH3-204ENST00000565453 GPRASP2Q96D09 838 aa18■□□□□ 0.47
CDH3-204ENST00000565453 SLC9A7Q96T83 725 aa18■□□□□ 0.47
CDH3-204ENST00000565453 USP26Q9BXU7 913 aa18■□□□□ 0.47
CDH3-204ENST00000565453 TUT1Q9H6E5 874 aaKnown RBP18■□□□□ 0.47
CDH3-204ENST00000565453 SLC28A3Q9HAS3 691 aa18■□□□□ 0.47
CDH3-204ENST00000565453 UBIAD1Q9Y5Z9 338 aa18■□□□□ 0.47
CDH3-204ENST00000565453 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
CDH3-204ENST00000565453 ATP9AO75110 1047 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 SMIM10L2AP0DMW4 78 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 SMIM10L2BP0DMW5 78 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 KCNA2P16389 499 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 ITGB5P18084 799 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 RCAN1P53805 252 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 MBTPS1Q14703 1052 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 ZNF618Q5T7W0 954 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 SERINC5Q86VE9 423 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 PCDHA6Q9UN73 950 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 PCDHA8Q9Y5H6 950 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 PTPRSQ13332 1948 aa17.99■□□□□ 0.47
CDH3-204ENST00000565453 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 C17orf102A2RUQ5 167 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 GOLGA8BA8MQT2 603 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
CDH3-204ENST00000565453 CPA1P15085 419 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 CDC27P30260 824 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 HSPA4P34932 840 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 CNKSR3Q6P9H4 555 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 TRIM50Q86XT4 487 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 HERC6Q8IVU3 1022 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 GAS2L1Q99501 681 aaPredicted RBP17.98■□□□□ 0.47
CDH3-204ENST00000565453 RNPEPQ9H4A4 650 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 SNX14Q9Y5W7 946 aa17.98■□□□□ 0.47
CDH3-204ENST00000565453 SPDYE3A6NKU9 549 aa17.97■□□□□ 0.47
CDH3-204ENST00000565453 WDR5P61964 334 aaKnown RBP17.97■□□□□ 0.47
CDH3-204ENST00000565453 PPP2R2DQ66LE6 453 aa17.97■□□□□ 0.47
CDH3-204ENST00000565453 TEX2Q8IWB9 1127 aa17.97■□□□□ 0.47
CDH3-204ENST00000565453 GIMAP8Q8ND71 665 aaPredicted RBP17.97■□□□□ 0.47
CDH3-204ENST00000565453 RIC8AQ9NPQ8 531 aa17.97■□□□□ 0.47
CDH3-204ENST00000565453 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
CDH3-204ENST00000565453 NID2Q14112 1375 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 STXBP3O00186 592 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 TREHO43280 583 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 ARHGEF15O94989 841 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 CA3P07451 260 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 ADAM17P78536 824 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 UTP14CQ5TAP6 766 aaKnown RBP17.96■□□□□ 0.47
CDH3-204ENST00000565453 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
CDH3-204ENST00000565453 ATP6V0A1Q93050 837 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 CDHR1Q96JP9 859 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 COL25A1Q9BXS0 654 aaPredicted RBP17.96■□□□□ 0.47
CDH3-204ENST00000565453 JADE2Q9NQC1 790 aa17.96■□□□□ 0.47
CDH3-204ENST00000565453 CHD9Q3L8U1 2897 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 GSTTP1A0A1W2PQM5 241 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 NAPAP54920 295 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 DEFB103AP81534 67 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 SP4Q02446 784 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 APOBRQ0VD83 1088 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
CDH3-204ENST00000565453 AGXT2Q9BYV1 514 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 SETD4Q9NVD3 440 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 BARHL2Q9NY43 387 aa17.95■□□□□ 0.46
CDH3-204ENST00000565453 ZNF215Q9UL58 517 aaPredicted RBP17.95■□□□□ 0.46
CDH3-204ENST00000565453 ABHD14A-ACY1A0A1B0GW23 586 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 RSPH10B2B2RC85 870 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 MAFGO15525 162 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 LGR5O75473 907 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 RSPH10BP0C881 870 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
CDH3-204ENST00000565453 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
CDH3-204ENST00000565453 THPOP40225 353 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 KCNJ6P48051 423 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 CLK2P49760 499 aaKnown RBP17.94■□□□□ 0.46
CDH3-204ENST00000565453 MKRN4PQ13434 485 aaPredicted RBP17.94■□□□□ 0.46
CDH3-204ENST00000565453 MTMR1Q13613 665 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 Q6ZUG5 572 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 PGBD1Q96JS3 809 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 EHMT1Q9H9B1 1298 aa17.94■□□□□ 0.46
CDH3-204ENST00000565453 SMCO2A6NFE2 343 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 CAND2O75155 1236 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 FOSP01100 380 aaPredicted RBP17.93■□□□□ 0.46
CDH3-204ENST00000565453 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 METAP2P50579 478 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDH3-204ENST00000565453 ADCY7P51828 1080 aa17.93■□□□□ 0.46
CDH3-204ENST00000565453 TAP1Q03518 808 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms