RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 USP51Q70EK9 711 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 DDX11Q96FC9 970 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 PEX11GQ96HA9 241 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 CYP26B1Q9NR63 512 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD9-215ENST00000565442 MRPS23Q9Y3D9 190 aaKnown RBP6.49□□□□□ -1.37
CHD9-215ENST00000565442 BLACEA4D250 179 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 C2orf71A6NGG8 1288 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 CANXP27824 592 aaKnown RBP6.48□□□□□ -1.37
CHD9-215ENST00000565442 CYP4F3Q08477 520 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 PLEKHG4Q58EX7 1191 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 FAM26FQ5R3K3 315 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 LIMS2Q7Z4I7 341 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 FAM124AQ86V42 546 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 TMEM145Q8NBT3 493 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 NETO2Q8NC67 525 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 KCTD13Q8WZ19 329 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 CCDC140Q96MF4 163 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 GPRC5CQ9NQ84 441 aa6.48□□□□□ -1.37
CHD9-215ENST00000565442 MROH6A6NGR9 719 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 ZBTB7AO95365 584 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 CYP2C8P10632 490 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 RPL13P26373 211 aaKnown RBP6.47□□□□□ -1.37
CHD9-215ENST00000565442 SUMO1P63165 101 aaKnown RBP6.47□□□□□ -1.37
CHD9-215ENST00000565442 TCEA2Q15560 299 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 FBLN5Q9UBX5 448 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 CD2APQ9Y5K6 639 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 BACE2Q9Y5Z0 518 aa6.47□□□□□ -1.37
CHD9-215ENST00000565442 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 RAPGEF3O95398 923 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 CPP00450 1065 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 THBDP07204 575 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 THBS2P35442 1172 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 SEPHS1P49903 392 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 GYS2P54840 703 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 KIAA0907Q7Z7F0 614 aaPredicted RBP6.46□□□□□ -1.38
CHD9-215ENST00000565442 LZTR1Q8N653 840 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 COPS5Q92905 334 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 FEZ1Q99689 392 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 GORASP1Q9BQQ3 440 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 ZNF747Q9BV97 191 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 PCED1AQ9H1Q7 454 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 VPS11Q9H270 941 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 NCOA5Q9HCD5 579 aaKnown RBP6.46□□□□□ -1.38
CHD9-215ENST00000565442 RWDD3Q9Y3V2 267 aa6.46□□□□□ -1.38
CHD9-215ENST00000565442 SCG5P05408 212 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 C8BP07358 591 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 MAP4K2Q12851 820 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 NTRK3Q16288 839 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 DENND5AQ6IQ26 1287 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 KREMEN2Q8NCW0 462 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 CDK5RAP1Q96SZ6 601 aaKnown RBP6.45□□□□□ -1.38
CHD9-215ENST00000565442 C11orf84Q9BUA3 381 aaPredicted RBP6.45□□□□□ -1.38
CHD9-215ENST00000565442 SLKQ9H2G2 1235 aaPredicted RBP6.45□□□□□ -1.38
CHD9-215ENST00000565442 CLEC1BQ9P126 229 aa6.45□□□□□ -1.38
CHD9-215ENST00000565442 ANKRD62A6NC57 917 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 PLS3P13797 630 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 SLC35F1Q5T1Q4 408 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 EEF1DP3Q658K8 133 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 SYNPOQ8N3V7 929 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 NPLOC4Q8TAT6 608 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 FRS2Q8WU20 508 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 CLUHP3Q96NS8 147 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 KLC2Q9H0B6 622 aa6.44□□□□□ -1.38
CHD9-215ENST00000565442 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
CHD9-215ENST00000565442 LAMTOR5O43504 91 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 C6orf222P0C671 652 aaPredicted RBP6.43□□□□□ -1.38
CHD9-215ENST00000565442 PABPC4Q13310 644 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHD9-215ENST00000565442 ICAM4Q14773 271 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 DALRD3Q5D0E6 543 aaKnown RBP6.43□□□□□ -1.38
CHD9-215ENST00000565442 MCTP2Q6DN12 878 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 PPIL6Q8IXY8 311 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 PCDH18Q9HCL0 1135 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 NDOR1Q9UHB4 597 aa6.43□□□□□ -1.38
CHD9-215ENST00000565442 NPHP3-ACAD11A0A0J9YXS1 232 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 ARNTLO00327 626 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 PLD2O14939 933 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 MEFVO15553 781 aaPredicted RBP6.42□□□□□ -1.38
CHD9-215ENST00000565442 SURF1Q15526 300 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 KCNT2Q6UVM3 1135 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 CPNE8Q86YQ8 564 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 CCDC103Q8IW40 242 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
CHD9-215ENST00000565442 KYQ8NBH2 561 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 TXNDC5Q8NBS9 432 aaKnown RBP6.42□□□□□ -1.38
CHD9-215ENST00000565442 MTA3Q9BTC8 594 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 SLC52A2Q9HAB3 445 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 SFMBT1Q9UHJ3 866 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
CHD9-215ENST00000565442 AMHP03971 560 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 PAMP19021 973 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 GABREP78334 506 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 SLC7A14Q8TBB6 771 aa6.41□□□□□ -1.38
CHD9-215ENST00000565442 PTPRN2Q92932 1015 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms