RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 TMEFF2Q9UIK5 374 aaPredicted RBP6.84□□□□□ -1.31
CHD9-214ENST00000565119 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
CHD9-214ENST00000565119 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
CHD9-214ENST00000565119 ARNTLO00327 626 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 TADA3O75528 432 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 ACO1P21399 889 aaKnown RBP6.83□□□□□ -1.32
CHD9-214ENST00000565119 CSF2RBP32927 897 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 FNDC7Q5VTL7 733 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 PCSK4Q6UW60 755 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 C1orf210Q8IVY1 113 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 IL17DQ8TAD2 202 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 NPLOC4Q8TAT6 608 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 CACTINQ8WUQ7 758 aaKnown RBP6.83□□□□□ -1.32
CHD9-214ENST00000565119 VOPP1Q96AW1 172 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 AJUBAQ96IF1 538 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 FBXL7Q9UJT9 491 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 EMC9Q9Y3B6 208 aa6.83□□□□□ -1.32
CHD9-214ENST00000565119 U2SURPO15042 1029 aaKnown RBP6.82□□□□□ -1.32
CHD9-214ENST00000565119 STEAP3Q658P3 488 aa6.82□□□□□ -1.32
CHD9-214ENST00000565119 DPY19L2P1Q6NXN4 242 aa6.82□□□□□ -1.32
CHD9-214ENST00000565119 PROSER1Q86XN7 944 aa6.82□□□□□ -1.32
CHD9-214ENST00000565119 LARP4BQ92615 738 aaKnown RBP6.82□□□□□ -1.32
CHD9-214ENST00000565119 NEIL1Q96FI4 390 aaPredicted RBP6.82□□□□□ -1.32
CHD9-214ENST00000565119 GZF1Q9H116 711 aaPredicted RBP6.82□□□□□ -1.32
CHD9-214ENST00000565119 SLC12A7Q9Y666 1083 aa6.82□□□□□ -1.32
CHD9-214ENST00000565119 LMO1P25800 156 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 CCDC81Q6ZN84 652 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 CCDC103Q8IW40 242 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 SCUBE1Q8IWY4 988 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 TMEM169Q96HH4 297 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 PLEKHG4BQ96PX9 1271 aa6.81□□□□□ -1.32
CHD9-214ENST00000565119 A0A1W2PQH9 124 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 KNG1P01042 644 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 MRPL58Q14197 206 aaKnown RBP6.8□□□□□ -1.32
CHD9-214ENST00000565119 CHRNA2Q15822 529 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 EMC4Q5J8M3 183 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 MMRN2Q9H8L6 949 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 HSPBP1Q9NZL4 362 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 COA3Q9Y2R0 106 aaPredicted RBP6.8□□□□□ -1.32
CHD9-214ENST00000565119 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 DMRT1Q9Y5R6 373 aa6.8□□□□□ -1.32
CHD9-214ENST00000565119 RAD17O75943 681 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 SMAD2Q15796 467 aaKnown RBP6.79□□□□□ -1.32
CHD9-214ENST00000565119 LRCH2Q5VUJ6 765 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 ZNF627Q7L945 461 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 IFNL2Q8IZJ0 200 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 CYP26B1Q9NR63 512 aa6.79□□□□□ -1.32
CHD9-214ENST00000565119 ADH4P08319 380 aa6.78□□□□□ -1.32
CHD9-214ENST00000565119 IL12RB1P42701 662 aa6.78□□□□□ -1.32
CHD9-214ENST00000565119 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
CHD9-214ENST00000565119 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
CHD9-214ENST00000565119 USP35Q9P2H5 1018 aa6.78□□□□□ -1.32
CHD9-214ENST00000565119 ANKRD34BA5PLL1 514 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 CHGBP05060 677 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 GTF2A2P52657 109 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 MAMDC4Q6UXC1 1216 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 DHX37Q8IY37 1157 aaKnown RBP6.77□□□□□ -1.33
CHD9-214ENST00000565119 C19orf47Q8N9M1 422 aaKnown RBP6.77□□□□□ -1.33
CHD9-214ENST00000565119 BVESQ8NE79 360 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 DIO2Q92813 273 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 KATNBL1Q9H079 304 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
CHD9-214ENST00000565119 ZNF888P0CJ79 500 aaPredicted RBP6.76□□□□□ -1.33
CHD9-214ENST00000565119 ATXN1P54253 815 aaKnown RBP6.76□□□□□ -1.33
CHD9-214ENST00000565119 TUBA3CQ13748 450 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 TUBA3EQ6PEY2 450 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 POMZP3Q6PJE2 187 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD9-214ENST00000565119 CRBNQ96SW2 442 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 LGR4Q9BXB1 951 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 NKX2-4Q9H2Z4 354 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 SLC30A1Q9Y6M5 507 aa6.76□□□□□ -1.33
CHD9-214ENST00000565119 MYO1BO43795 1136 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 ACRV1P26436 265 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 RAC3P60763 192 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 E4F1Q66K89 784 aaPredicted RBP6.75□□□□□ -1.33
CHD9-214ENST00000565119 VASNQ6EMK4 673 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 KIAA1211LQ6NV74 962 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 POLNQ7Z5Q5 900 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 RCBTB1Q8NDN9 531 aa6.75□□□□□ -1.33
CHD9-214ENST00000565119 ZNF483Q8TF39 744 aaPredicted RBP6.75□□□□□ -1.33
CHD9-214ENST00000565119 H7BY64 318 aa6.74□□□□□ -1.33
CHD9-214ENST00000565119 USP10Q14694 798 aaKnown RBP6.74□□□□□ -1.33
CHD9-214ENST00000565119 REXO1L1PQ8IX06 675 aa6.74□□□□□ -1.33
CHD9-214ENST00000565119 CRACR2BQ8N4Y2 399 aaPredicted RBP6.74□□□□□ -1.33
CHD9-214ENST00000565119 MRGPRX3Q96LB0 322 aa6.74□□□□□ -1.33
CHD9-214ENST00000565119 ZFP69BQ9UJL9 534 aa6.74□□□□□ -1.33
CHD9-214ENST00000565119 OAZ3Q9UMX2 235 aa6.74□□□□□ -1.33
CHD9-214ENST00000565119 FBXO21O94952 628 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 CKMP06732 381 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 CR2P20023 1033 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 MAKP20794 623 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 GLRBP48167 497 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 KCNAB2Q13303 367 aa6.73□□□□□ -1.33
CHD9-214ENST00000565119 LDLRAD1Q5T700 205 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms