RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 CYP2C8P10632 490 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 PDE6AP16499 860 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 KRT15P19012 456 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 ST5P78524 1137 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 TUSC3Q13454 348 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 ARHGAP36Q6ZRI8 547 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 STK32CQ86UX6 486 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 HOMER1Q86YM7 354 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 ZSCAN18Q8TBC5 510 aaPredicted RBP6.25□□□□□ -1.41
PALB2-203ENST00000565038 PHOSPHO1Q8TCT1 267 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 SH3RF2Q8TEC5 729 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 DACT3Q96B18 629 aaPredicted RBP6.25□□□□□ -1.41
PALB2-203ENST00000565038 TOE1Q96GM8 510 aaKnown RBP6.25□□□□□ -1.41
PALB2-203ENST00000565038 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
PALB2-203ENST00000565038 TCRBV16S1A1N1A0A5B0 115 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 CCDC66A2RUB6 948 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 KCNK3O14649 394 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 WNT9AO14904 365 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 CKMP06732 381 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 AFF3P51826 1226 aaKnown RBP6.24□□□□□ -1.41
PALB2-203ENST00000565038 JAG1P78504 1218 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 CR1LQ2VPA4 569 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 FAM47CQ5HY64 1035 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 NOP9Q86U38 636 aaKnown RBP6.24□□□□□ -1.41
PALB2-203ENST00000565038 CISD2Q8N5K1 135 aaKnown RBP6.24□□□□□ -1.41
PALB2-203ENST00000565038 APPBP2Q92624 585 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 GORASP1Q9BQQ3 440 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 DTLQ9NZJ0 730 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 CD2APQ9Y5K6 639 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 PMF1-BGLAPU3KQ54 211 aa6.24□□□□□ -1.41
PALB2-203ENST00000565038 LRG1P02750 347 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 AMY2AP04746 511 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 APPP05067 770 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 KCNA6P17658 529 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 AMY2BP19961 511 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 JAM2P57087 298 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 SMAD4Q13485 552 aaKnown RBP6.23□□□□□ -1.41
PALB2-203ENST00000565038 GPR19Q15760 415 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 CRY1Q16526 586 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 FNDC3BQ53EP0 1204 aaKnown RBP6.23□□□□□ -1.41
PALB2-203ENST00000565038 GIMAP6Q6P9H5 292 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 ABHD17CQ6PCB6 329 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
PALB2-203ENST00000565038 PTRH1Q86Y79 214 aaKnown RBP6.23□□□□□ -1.41
PALB2-203ENST00000565038 TRIM48Q8IWZ4 208 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 FNIP1Q8TF40 1166 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 RBPJLQ9UBG7 517 aa6.23□□□□□ -1.41
PALB2-203ENST00000565038 CDC45O75419 566 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 DNAJC8O75937 253 aaPredicted RBP6.22□□□□□ -1.41
PALB2-203ENST00000565038 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
PALB2-203ENST00000565038 SDSP20132 328 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 NKX3-2P78367 333 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 PABPC4Q13310 644 aaKnown RBP eCLIP6.22□□□□□ -1.41
PALB2-203ENST00000565038 TCEA2Q15560 299 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 TCERG1LQ5VWI1 586 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 TEPPQ6URK8 271 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 LCNL1Q6ZST4 164 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 C16orf86Q6ZW13 317 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.22□□□□□ -1.41
PALB2-203ENST00000565038 ADGRG2Q8IZP9 1017 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 NLGN1Q8N2Q7 840 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 IGSF22Q8N9C0 903 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 ZBTB8AQ96BR9 441 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 TBX22Q9Y458 520 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 NUB1Q9Y5A7 615 aa6.22□□□□□ -1.41
PALB2-203ENST00000565038 TNPO3Q9Y5L0 923 aaKnown RBP6.22□□□□□ -1.41
PALB2-203ENST00000565038 A0A1B0GTL3 188 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 MAN2B1O00754 1011 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 GSTA4O15217 222 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 OPA1O60313 960 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 HTRA3P83110 453 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 ZNF460Q14592 562 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.42
PALB2-203ENST00000565038 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
PALB2-203ENST00000565038 C11orf84Q9BUA3 381 aaPredicted RBP6.21□□□□□ -1.42
PALB2-203ENST00000565038 SMURF1Q9HCE7 757 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 SRPK3Q9UPE1 567 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 WASF3Q9UPY6 502 aa6.21□□□□□ -1.42
PALB2-203ENST00000565038 ZNF561-AS1K7EIQ3 104 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 ACOT7O00154 380 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 FFAR3O14843 346 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 EPHA5P54756 1037 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 ITGA1P56199 1179 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 VWA3BQ502W6 1294 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 TMEM151BQ8IW70 566 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 TTLL11Q8NHH1 800 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 ZSWIM3Q96MP5 696 aa6.2□□□□□ -1.42
PALB2-203ENST00000565038 CELF4Q9BZC1 486 aaKnown RBP6.2□□□□□ -1.42
PALB2-203ENST00000565038 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
PALB2-203ENST00000565038 SPATA6Q9NWH7 488 aaPredicted RBP6.2□□□□□ -1.42
PALB2-203ENST00000565038 TLDC2A0PJX2 215 aa6.19□□□□□ -1.42
PALB2-203ENST00000565038 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms