RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TRIM50Q86XT4 487 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 RPUSD2Q8IZ73 545 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 FTOQ9C0B1 505 aaKnown RBP eCLIP15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 RIC8AQ9NPQ8 531 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 GTF2IRD1Q9UHL9 959 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 TET1Q8NFU7 2136 aa15.61■□□□□ 0.09
VPS9D1-204ENST00000565023 HAS3O00219 553 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 ATP9AO75110 1047 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 IQCF3P0C7M6 154 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 DNAJB2P25686 324 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 PBX2P40425 430 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 ANAPC15P60006 121 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 STK3Q13188 491 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 BFSP2Q13515 415 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 PPP1R18Q6NYC8 613 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 XRRA1Q6P2D8 792 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 METTL7BQ6UX53 244 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 RUFY3Q7L099 469 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 FBXL16Q8N461 479 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 GUCD1Q96NT3 240 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 C16orf70Q9BSU1 422 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 SLC26A6Q9BXS9 759 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 ANO3Q9BYT9 981 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 TM6SF1Q9BZW5 370 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 MTIF3Q9H2K0 278 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 ZSWIM6Q9HCJ5 1215 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 BARHL2Q9NY43 387 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 CYP46A1Q9Y6A2 500 aa15.6■□□□□ 0.09
VPS9D1-204ENST00000565023 H3BRB1 525 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 SCG2P13521 617 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 ITGB5P18084 799 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 RCAN1P53805 252 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 MTMR1Q13613 665 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 HIC1Q14526 733 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 PFKFB3Q16875 520 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 SESTD1Q86VW0 696 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 CCDC155Q8N6L0 562 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 HERVK_113Q902F9 699 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 DHX38Q92620 1227 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 GPRASP2Q96D09 838 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 IL17RAQ96F46 866 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 UIMC1Q96RL1 719 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 GPR20Q99678 358 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 AGXT2Q9BYV1 514 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 TTYH1Q9H313 450 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 SEMA6BQ9H3T3 888 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 TUT1Q9H6E5 874 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 UBIAD1Q9Y5Z9 338 aa15.59■□□□□ 0.09
VPS9D1-204ENST00000565023 C17orf102A2RUQ5 167 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 hCG_1984214I3L0E3 225 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 HOXD8P13378 290 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 PDIA3P30101 505 aaKnown RBP15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 ZNF76P36508 570 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 ZNF713Q8N859 430 aaPredicted RBP15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 MYLIPQ8WY64 445 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 WNT8BQ93098 351 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 TIFAQ96CG3 184 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 VWCEQ96DN2 955 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 CTAGE1Q96RT6 745 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 PBX4Q9BYU1 374 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 JADE2Q9NQC1 790 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 SLC4A7Q9Y6M7 1214 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 MYO9BQ13459 2157 aa15.58■□□□□ 0.08
VPS9D1-204ENST00000565023 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 PRPF3O43395 683 aaKnown RBP15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 SMIM10L2AP0DMW4 78 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 SMIM10L2BP0DMW5 78 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 KCNA2P16389 499 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 MARK3P27448 753 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 RABGGTBP53611 331 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 PKN1Q16512 942 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 RASIP1Q5U651 963 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 LRRC8DQ7L1W4 858 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 CYP2W1Q8TAV3 490 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 CAGE1Q8TC20 777 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 RASGRP4Q8TDF6 673 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 CDHR1Q96JP9 859 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 CDX2Q99626 313 aaPredicted RBP15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 MXRA8Q9BRK3 442 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 PDRG1Q9NUG6 133 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 SETD4Q9NVD3 440 aa15.57■□□□□ 0.08
VPS9D1-204ENST00000565023 DDX39AO00148 427 aaKnown RBP15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 DTNBO60941 627 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 FOSP01100 380 aaPredicted RBP15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 ARP10275 920 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 CKBP12277 381 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 ACTN1P12814 892 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 SELPP16109 830 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 TCF7P36402 384 aaPredicted RBP15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 GIMAP8Q8ND71 665 aaPredicted RBP15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 AFAP1L1Q8TED9 768 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 ATP6V0A1Q93050 837 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 SENP7Q9BQF6 1050 aa15.56■□□□□ 0.08
VPS9D1-204ENST00000565023 NKX2-4Q9H2Z4 354 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms