RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 LTFP02788 710 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 CPEP16870 476 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 SPIRE1Q08AE8 756 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 MTMR1Q13613 665 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 SART3Q15020 963 aaKnown RBP6.64□□□□□ -1.35
CDH1-207ENST00000564745 SEC23AQ15436 765 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 FYB2Q5VWT5 728 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 CPZQ66K79 652 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 MYLIPQ8WY64 445 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 RNF32Q9H0A6 362 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 RC3H2Q9HBD1 1191 aaKnown RBP6.64□□□□□ -1.35
CDH1-207ENST00000564745 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 SLC6A20Q9NP91 592 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 SLC5A4Q9NY91 659 aa6.64□□□□□ -1.35
CDH1-207ENST00000564745 G3BP2Q9UN86 482 aaKnown RBP6.64□□□□□ -1.35
CDH1-207ENST00000564745 A0A1W2PQJ5 194 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 SLC27A2O14975 620 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 TGM5O43548 720 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 ZEB2O60315 1214 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 BRINP1O60477 761 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 PMLP29590 882 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 RNF219Q5W0B1 726 aaPredicted RBP6.63□□□□□ -1.35
CDH1-207ENST00000564745 STEAP3Q658P3 488 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 NOSTRINQ8IVI9 506 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
CDH1-207ENST00000564745 ABI1Q8IZP0 508 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 AGBL5Q8NDL9 886 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 UHMK1Q8TAS1 419 aaKnown RBP6.63□□□□□ -1.35
CDH1-207ENST00000564745 CCDC120Q96HB5 630 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 EMC7Q9NPA0 242 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 TYW1Q9NV66 732 aaKnown RBP6.63□□□□□ -1.35
CDH1-207ENST00000564745 DSEQ9UL01 958 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 SRPK3Q9UPE1 567 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 THRAP3Q9Y2W1 955 aaKnown RBP6.63□□□□□ -1.35
CDH1-207ENST00000564745 HCFC2Q9Y5Z7 792 aa6.63□□□□□ -1.35
CDH1-207ENST00000564745 SCO2A0A1W2PP80 73 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 SLC12A8A0AV02 714 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 ZC3H12DA2A288 527 aaKnown RBP6.62□□□□□ -1.35
CDH1-207ENST00000564745 ALG1L2C9J202 215 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 SCDO00767 359 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 SGSM2O43147 1006 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 DBHP09172 617 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 SLC9A1P19634 815 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 LSSP48449 732 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 IRF9Q00978 393 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 ATP13A4Q4VNC1 1196 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 HHIPL2Q6UWX4 724 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 SPATS2Q86XZ4 545 aaKnown RBP6.62□□□□□ -1.35
CDH1-207ENST00000564745 MTMR8Q96EF0 704 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 BOCQ9BWV1 1114 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 ASPSCR1Q9BZE9 553 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 MS4A5Q9H3V2 200 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 TNFRSF12AQ9NP84 129 aa6.62□□□□□ -1.35
CDH1-207ENST00000564745 APOBEC2Q9Y235 224 aaKnown RBP6.62□□□□□ -1.35
CDH1-207ENST00000564745 TADA3O75528 432 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 PRKD3O94806 890 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 S100BP04271 92 aaPredicted RBP6.61□□□□□ -1.35
CDH1-207ENST00000564745 RAC2P15153 192 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 PNLIPP16233 465 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
CDH1-207ENST00000564745 EXOSC10Q01780 885 aaKnown RBP6.61□□□□□ -1.35
CDH1-207ENST00000564745 LRP8Q14114 963 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 ARHGAP44Q17R89 818 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 LILRA2Q8N149 483 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 CNTD1Q8N815 330 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 CLEC4DQ8WXI8 215 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
CDH1-207ENST00000564745 LCHNA4D1U4 455 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 FAM90A27PA6NNH2 459 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 KRIT1O00522 736 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 HGSO14964 777 aaPredicted RBP6.6□□□□□ -1.35
CDH1-207ENST00000564745 ITKQ08881 620 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 TUSC3Q13454 348 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 HDGFL2Q7Z4V5 671 aaPredicted RBP6.6□□□□□ -1.35
CDH1-207ENST00000564745 NECAB2Q7Z6G3 386 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 KIAA1958Q8N8K9 716 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 ABHD4Q8TB40 342 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 PANK1Q8TE04 598 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 SMAD5Q99717 465 aaKnown RBP6.6□□□□□ -1.35
CDH1-207ENST00000564745 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 MYOTQ9UBF9 498 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 PALD1Q9ULE6 856 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 PLA2G2DQ9UNK4 145 aa6.6□□□□□ -1.35
CDH1-207ENST00000564745 BTBD11A6QL63 1104 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 NUDT19A8MXV4 375 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
CDH1-207ENST00000564745 H7C1D1 291 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 PTX3P26022 381 aaPredicted RBP6.59□□□□□ -1.35
CDH1-207ENST00000564745 SLC6A11P48066 632 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 GRIN1Q05586 938 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 SNX17Q15036 470 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 FIGNQ5HY92 759 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 KCTD1Q719H9 257 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 MILR1Q7Z6M3 343 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 CABP7Q86V35 215 aa6.59□□□□□ -1.35
CDH1-207ENST00000564745 NETO2Q8NC67 525 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms