RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TMEM260Q9NX78 707 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 UMODL1Q5DID0 1318 aa20.98■□□□□ 0.95
SYNGR3-204ENST00000564642 ESYT2A0FGR8 921 aa20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 GNA11P29992 359 aa20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 CLK2P49760 499 aaKnown RBP20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 JAKMIP3Q5VZ66 844 aa20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 MCTP2Q6DN12 878 aa20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 HDAC6Q9UBN7 1215 aa20.97■□□□□ 0.95
SYNGR3-204ENST00000564642 HAS3O00219 553 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 ATP9AO75110 1047 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 ACRP10323 421 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 ZNF76P36508 570 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 SP4Q02446 784 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 ANKRD1Q15327 319 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 GDF6Q6KF10 455 aaPredicted RBP20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 GPR153Q6NV75 609 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 RETREG2Q8NC44 543 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 CCDC148Q8NFR7 591 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 GPR20Q99678 358 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 MXRA8Q9BRK3 442 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 C16orf70Q9BSU1 422 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 IL23AQ9NPF7 189 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 GTF2IRD1Q9UHL9 959 aa20.96■□□□□ 0.95
SYNGR3-204ENST00000564642 H3BRB1 525 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 SEC24BO95487 1268 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 LGALS2P05162 132 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 BFSP2Q13515 415 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 RPUSD2Q8IZ73 545 aaKnown RBP20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 CCDC155Q8N6L0 562 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 BICD2Q8TD16 824 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 TUT1Q9H6E5 874 aaKnown RBP20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 PKD2L1Q9P0L9 805 aa20.95■□□□□ 0.94
SYNGR3-204ENST00000564642 KCNA2P16389 499 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 SREBF1P36956 1147 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 TMEM240Q5SV17 173 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 PSRC1Q6PGN9 363 aaPredicted RBP20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 ZNF365Q70YC5 407 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 C16orf59Q7L2K0 433 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 REXO1Q8N1G1 1221 aaKnown RBP20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 SCLYQ96I15 445 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 WNT8AQ9H1J5 351 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 SH3GLB2Q9NR46 395 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 TRIP12Q14669 1992 aaPredicted RBP20.94■□□□□ 0.94
SYNGR3-204ENST00000564642 DEXIO95424 95 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 FGBP02675 491 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 NLRP5P59047 1200 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 ARHGAP4P98171 946 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 CEP55Q53EZ4 464 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 UTP14CQ5TAP6 766 aaKnown RBP20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 SEPT1Q8WYJ6 367 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 KCNH7Q9NS40 1196 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 TPCN1Q9ULQ1 816 aa20.93■□□□□ 0.94
SYNGR3-204ENST00000564642 PITPNM1O00562 1244 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 CDKL5O76039 1030 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 AK2P54819 239 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 SCRN1Q12765 414 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 CYP2W1Q8TAV3 490 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 CAGE1Q8TC20 777 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 IL17RAQ96F46 866 aa20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 ZNF215Q9UL58 517 aaPredicted RBP20.92■□□□□ 0.94
SYNGR3-204ENST00000564642 ARP10275 920 aa20.91■□□□□ 0.94
SYNGR3-204ENST00000564642 TCF7P36402 384 aaPredicted RBP20.91■□□□□ 0.94
SYNGR3-204ENST00000564642 NEK4P51957 841 aa20.91■□□□□ 0.94
SYNGR3-204ENST00000564642 SDF4Q9BRK5 362 aa20.91■□□□□ 0.94
SYNGR3-204ENST00000564642 TELO2Q9Y4R8 837 aa20.91■□□□□ 0.94
SYNGR3-204ENST00000564642 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 C17orf102A2RUQ5 167 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 MEIS1O00470 390 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 ADAMTS3O15072 1205 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 PFKFB2O60825 505 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 PFKMP08237 780 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 CYP3A4P08684 503 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 IQCF3P0C7M6 154 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 RFC2P35250 354 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 SMAD3P84022 425 aaKnown RBP20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 PTK7Q13308 1070 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 NIPA1Q7RTP0 329 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 DEFB128Q7Z7B8 93 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 DEFB123Q8N688 67 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 CTAGE1Q96RT6 745 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 COL25A1Q9BXS0 654 aaPredicted RBP20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 JPH1Q9HDC5 661 aaPredicted RBP20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 SLC9A2Q9UBY0 812 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 LAMA3Q16787 3333 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 SCN5AQ14524 2016 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 KAT6AQ92794 2004 aa20.9■□□□□ 0.94
SYNGR3-204ENST00000564642 NFASCO94856 1347 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 GSTTP1A0A1W2PQM5 241 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 SMIM10L2AP0DMW4 78 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 SMIM10L2BP0DMW5 78 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 ZNF200P98182 395 aaPredicted RBP20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 OTOP2Q7RTS6 562 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 PLA2G4DQ86XP0 818 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 TRIM50Q86XT4 487 aa20.89■□□□□ 0.93
SYNGR3-204ENST00000564642 RASGRP4Q8TDF6 673 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms