RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 COPB2P35606 906 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 DEKP35659 375 aaKnown RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 ACLYP53396 1101 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 OAZ1P54368 228 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 AP3B2Q13367 1082 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 KCNA10Q16322 511 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 FBXO11Q86XK2 927 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 FBXO16Q8IX29 292 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 CHST13Q8NET6 341 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 PPP1R13LQ8WUF5 828 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 ANP32BQ92688 251 aaKnown RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 GUCD1Q96NT3 240 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
UBFD1-203ENST00000564106 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 UNC80Q8N2C7 3258 aa11.03□□□□□ -0.64
UBFD1-203ENST00000564106 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 SMPD1P17405 629 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 MARCKSP29966 332 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 TXLNAP40222 546 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 PRPHP41219 470 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 FAAP100Q0VG06 881 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 ZRSR1Q15695 479 aaKnown RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 C1orf53Q5VUE5 145 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 RBM43Q6ZSC3 357 aaKnown RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 FMR1NBQ8N0W7 255 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 DEFB123Q8N688 67 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 GNEQ9Y223 722 aaKnown RBP11.02□□□□□ -0.65
UBFD1-203ENST00000564106 PCDHA1Q9Y5I3 950 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 GRIN2DO15399 1336 aa11.02□□□□□ -0.65
UBFD1-203ENST00000564106 A0A0C4DFX4 3053 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 POTEB2H3BUK9 544 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 ASGR1P07306 291 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 PFKFB1P16118 471 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 LONP1P36776 959 aaKnown RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 SYKP43405 635 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 GJA9P57773 515 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 SNW1Q13573 536 aaKnown RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 KANK3Q6NY19 840 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 SASS6Q6UVJ0 657 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 ELOA2Q8IYF1 753 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 MSL3Q8N5Y2 521 aaKnown RBP11.01□□□□□ -0.65
UBFD1-203ENST00000564106 TBC1D5Q92609 795 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 FAM161BQ96MY7 647 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 FAM184BQ9ULE4 1060 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 CCPG1Q9ULG6 757 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 HPSEQ9Y251 543 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
UBFD1-203ENST00000564106 CUL9Q8IWT3 2517 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 A0A1B0GVL5 298 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 FAM205CA6NFA0 338 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 NEMFO60524 1076 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 DUSP11O75319 330 aaKnown RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 ZNF202O95125 648 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 ICAM1P05362 532 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 CLTBP09497 229 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 CST5P28325 142 aaPredicted RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 MCM7P33993 719 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 CDK7P50613 346 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 NDUFA8P51970 172 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 PTGDRQ13258 359 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 INF2Q27J81 1249 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 EARS2Q5JPH6 523 aaKnown RBP11□□□□□ -0.65
UBFD1-203ENST00000564106 SHC4Q6S5L8 630 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 C16orf59Q7L2K0 433 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 RNF180Q86T96 592 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 VWCEQ96DN2 955 aa11□□□□□ -0.65
UBFD1-203ENST00000564106 AK8Q96MA6 479 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms