RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 KIAA1522Q9P206 1035 aaPredicted RBP6.63□□□□□ -1.35
SH3GL3-206ENST00000564054 GPR55Q9Y2T6 319 aaPredicted RBP6.63□□□□□ -1.35
SH3GL3-206ENST00000564054 PHRF1Q9P1Y6 1649 aaKnown RBP6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 NWD1Q149M9 1564 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 RTL1A6NKG5 1358 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 KIAA0232Q92628 1395 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 FADS2P1A8MWK0 482 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 SCAMP3O14828 347 aaKnown RBP6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 PRAMEF1O95521 474 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 TCF3P15923 654 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 PFKLP17858 780 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 ZNF76P36508 570 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 HDAC1Q13547 482 aaPredicted RBP6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 NBPF12Q5TAG4 269 aaPredicted RBP6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 NUP43Q8NFH3 380 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 TMEM74Q96NL1 305 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 METTL5Q9NRN9 209 aaKnown RBP6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 RGPD5Q99666 1765 aa6.62□□□□□ -1.35
SH3GL3-206ENST00000564054 KDRP35968 1356 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 IGSF1Q8N6C5 1336 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQ27 194 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQ64 194 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQC6 194 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQD8 194 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 CHL1O00533 1208 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 SIGLEC6O43699 453 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 UBOX5O94941 541 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 RECKO95980 971 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 HOXC9P31274 260 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 NCKAP1LP55160 1127 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 FAM160A1Q05DH4 1040 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 EFEMP1Q12805 493 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 SNW1Q13573 536 aaKnown RBP6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 REC114Q7Z4M0 266 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 TMEM57Q8N5G2 664 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 GOLM1Q8NBJ4 401 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 RNF34Q969K3 372 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 RHOVQ96L33 236 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 THUMPD2Q9BTF0 503 aaKnown RBP6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 CDADC1Q9BWV3 514 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 PALD1Q9ULE6 856 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 TNNQ9UQP3 1299 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 PCDHA5Q9Y5H7 936 aa6.61□□□□□ -1.35
SH3GL3-206ENST00000564054 SOS1Q07889 1333 aaPredicted RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 FAM83GA6ND36 823 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 ELL2O00472 640 aaPredicted RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 DCTN1Q14203 1278 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 RTP5Q14D33 572 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 CWF19L2Q2TBE0 894 aaKnown RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 C8orf58Q8NAV2 365 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 IP6K1Q92551 441 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 UBXN4Q92575 508 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 UPF2Q9HAU5 1272 aaKnown RBP6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 CHST7Q9NS84 486 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 ZBTB40Q9NUA8 1239 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 BABAM1Q9NWV8 329 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 GMIPQ9P107 970 aa6.6□□□□□ -1.35
SH3GL3-206ENST00000564054 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 TRPM3Q9HCF6 1732 aaPredicted RBP6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 LMO7Q8WWI1 1683 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 PTPRCP08575 1304 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 LRRC37A3O60309 1634 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 MINDY4BA8MYZ0 360 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 CLEC3AO75596 197 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 INSRRP14616 1297 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 PUM1Q14671 1186 aaKnown RBP eCLIP6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 NR1I3Q14994 352 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 MTHFSDQ2M296 383 aaKnown RBP6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 UBXN11Q5T124 520 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 MCM10Q7L590 875 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 TSPYL6Q8N831 410 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 GCC1Q96CN9 775 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 GPR20Q99678 358 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 PRDM14Q9GZV8 571 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 TNFRSF12AQ9NP84 129 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 TSPYL4Q9UJ04 414 aa6.59□□□□□ -1.35
SH3GL3-206ENST00000564054 ABCC4O15439 1325 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 MEIS1O00470 390 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 ZC3H6P61129 1189 aaKnown RBP6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 FANCCQ00597 558 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 LDLRAD1Q5T700 205 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 RPTNQ6XPR3 784 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 SMC5Q8IY18 1101 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 TP53I13Q8NBR0 393 aaPredicted RBP6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 STK31Q9BXU1 1019 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 ERVK13-1Q9NX77 482 aa6.58□□□□□ -1.36
SH3GL3-206ENST00000564054 ACSL6Q9UKU0 697 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms