RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ICAM3P32942 547 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 CAMK1Q14012 370 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 EFHBQ8N7U6 833 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 DDX41Q9UJV9 622 aaKnown RBP18.65■□□□□ 0.58
RNF40-205ENST00000563909 PNMA2Q9UL42 364 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 EPG5Q9HCE0 2579 aa18.65■□□□□ 0.58
RNF40-205ENST00000563909 RGS20O76081 388 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 CTSHP09668 335 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 LAMC2Q13753 1193 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 PTPN21Q16825 1174 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 FRMD5Q7Z6J6 570 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 NKD2Q969F2 451 aaPredicted RBP18.64■□□□□ 0.57
RNF40-205ENST00000563909 EMID1Q96A84 441 aaPredicted RBP18.64■□□□□ 0.57
RNF40-205ENST00000563909 RIPOR3Q96MK2 946 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 CACNA1BQ00975 2339 aa18.64■□□□□ 0.57
RNF40-205ENST00000563909 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
RNF40-205ENST00000563909 M0R2C6 588 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
RNF40-205ENST00000563909 PPARAQ07869 468 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 STXBP2Q15833 593 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 KBTBD3Q8NAB2 608 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 PPTC7Q8NI37 304 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
RNF40-205ENST00000563909 ATP6V0A1Q93050 837 aa18.63■□□□□ 0.57
RNF40-205ENST00000563909 BARX2Q9UMQ3 279 aaPredicted RBP18.63■□□□□ 0.57
RNF40-205ENST00000563909 DNAH14Q0VDD8 3507 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 MED19A0JLT2 244 aaPredicted RBP18.62■□□□□ 0.57
RNF40-205ENST00000563909 KRT37O76014 449 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 NRIP1P48552 1158 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 ZBTB33Q86T24 672 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 RBM23Q86U06 439 aaKnown RBP18.62■□□□□ 0.57
RNF40-205ENST00000563909 APBB2Q92870 758 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 TAAR1Q96RJ0 339 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 PLVAPQ9BX97 442 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 ADGRA3Q8IWK6 1321 aa18.62■□□□□ 0.57
RNF40-205ENST00000563909 FRYLO94915 3013 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 PPFIA4O75335 1185 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 DNAJB1P25685 340 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 NUCB1Q02818 461 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 BTG3Q14201 252 aaPredicted RBP18.61■□□□□ 0.57
RNF40-205ENST00000563909 RGS22Q8NE09 1264 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 NSUN6Q8TEA1 469 aaKnown RBP18.61■□□□□ 0.57
RNF40-205ENST00000563909 GPATCH3Q96I76 525 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 NAPBQ9H115 298 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 MRVI1Q9Y6F6 885 aa18.61■□□□□ 0.57
RNF40-205ENST00000563909 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 GLP2RO95838 553 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 ZFYP08048 801 aaPredicted RBP18.6■□□□□ 0.57
RNF40-205ENST00000563909 USH1GQ495M9 461 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 TMEM105Q8N8V8 129 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 TBC1D5Q92609 795 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
RNF40-205ENST00000563909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
RNF40-205ENST00000563909 KMT2BQ9UMN6 2715 aaPredicted RBP18.6■□□□□ 0.57
RNF40-205ENST00000563909 TREHO43280 583 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 SORBS3O60504 671 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 RANBP6O60518 1105 aaKnown RBP18.59■□□□□ 0.57
RNF40-205ENST00000563909 HOXD8P13378 290 aaPredicted RBP18.59■□□□□ 0.57
RNF40-205ENST00000563909 ATF7P17544 494 aaPredicted RBP18.59■□□□□ 0.57
RNF40-205ENST00000563909 NOVP48745 357 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
RNF40-205ENST00000563909 SPPL3Q8TCT6 385 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 RMDN3Q96TC7 470 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
RNF40-205ENST00000563909 RC3H2Q9HBD1 1191 aaKnown RBP18.59■□□□□ 0.57
RNF40-205ENST00000563909 CAND2O75155 1236 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.56
RNF40-205ENST00000563909 ITGB1P05556 798 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 MCTP2Q6DN12 878 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.56
RNF40-205ENST00000563909 P2RX5Q93086 422 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 SPATA33Q96N06 139 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 COL20A1Q9P218 1284 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 NCOR2Q9Y618 2525 aa18.58■□□□□ 0.56
RNF40-205ENST00000563909 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 SMIM10L2AP0DMW4 78 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 SMIM10L2BP0DMW5 78 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 HSDL1Q3SXM5 330 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 MYSM1Q5VVJ2 828 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 TSHZ3Q63HK5 1081 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 SUSD6Q92537 303 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 TMEM47Q9BQJ4 181 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 C16orf70Q9BSU1 422 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 TLE6Q9H808 572 aa18.57■□□□□ 0.56
RNF40-205ENST00000563909 TOP1P11387 765 aaKnown RBP18.56■□□□□ 0.56
RNF40-205ENST00000563909 EIF2AK2P19525 551 aaKnown RBP18.56■□□□□ 0.56
RNF40-205ENST00000563909 MX1P20591 662 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 ARHGEF16Q5VV41 709 aa18.56■□□□□ 0.56
RNF40-205ENST00000563909 DGLUCYQ7Z3D6 616 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms