RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 NSUN7Q8NE18 718 aaKnown RBP21.33■■□□□ 1.01
CDH11-206ENST00000562998 RASGRP4Q8TDF6 673 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 C16orf70Q9BSU1 422 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 KCNH7Q9NS40 1196 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 PRKAG2Q9UGJ0 569 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 PCDHA4Q9UN74 947 aa21.33■■□□□ 1.01
CDH11-206ENST00000562998 IGLV3-22A0A075B6J6 115 aa21.32■■□□□ 1
CDH11-206ENST00000562998 FAM86B1E9PN63 330 aa21.32■■□□□ 1
CDH11-206ENST00000562998 SORBS3O60504 671 aa21.32■■□□□ 1
CDH11-206ENST00000562998 DTNBO60941 627 aa21.32■■□□□ 1
CDH11-206ENST00000562998 FAM86B2P0C5J1 330 aa21.32■■□□□ 1
CDH11-206ENST00000562998 CIITAP33076 1130 aa21.32■■□□□ 1
CDH11-206ENST00000562998 NLRP5P59047 1200 aa21.32■■□□□ 1
CDH11-206ENST00000562998 IL27Q8NEV9 243 aa21.32■■□□□ 1
CDH11-206ENST00000562998 GPR20Q99678 358 aa21.32■■□□□ 1
CDH11-206ENST00000562998 PHF20Q9BVI0 1012 aa21.32■■□□□ 1
CDH11-206ENST00000562998 PRDM5Q9NQX1 630 aaPredicted RBP21.32■■□□□ 1
CDH11-206ENST00000562998 TMEM39AQ9NV64 488 aa21.32■■□□□ 1
CDH11-206ENST00000562998 A0A1W2PPC1 479 aa21.31■■□□□ 1
CDH11-206ENST00000562998 TLR3O15455 904 aaKnown RBP21.31■■□□□ 1
CDH11-206ENST00000562998 ARP10275 920 aa21.31■■□□□ 1
CDH11-206ENST00000562998 RABEP1Q15276 862 aa21.31■■□□□ 1
CDH11-206ENST00000562998 HABP4Q5JVS0 413 aaKnown RBP21.31■■□□□ 1
CDH11-206ENST00000562998 TRPV6Q9H1D0 765 aa21.31■■□□□ 1
CDH11-206ENST00000562998 ORC3Q9UBD5 711 aaPredicted RBP21.31■■□□□ 1
CDH11-206ENST00000562998 TRIOBPQ9H2D6 2365 aa21.3■■□□□ 1
CDH11-206ENST00000562998 TIMP1P01033 207 aa21.3■■□□□ 1
CDH11-206ENST00000562998 MDM2Q00987 491 aaPredicted RBP21.3■■□□□ 1
CDH11-206ENST00000562998 BLIDQ8IZY5 108 aa21.3■■□□□ 1
CDH11-206ENST00000562998 BADQ92934 168 aa21.3■■□□□ 1
CDH11-206ENST00000562998 CTAGE1Q96RT6 745 aa21.3■■□□□ 1
CDH11-206ENST00000562998 BACH2Q9BYV9 841 aa21.3■■□□□ 1
CDH11-206ENST00000562998 GJB4Q9NTQ9 266 aa21.3■■□□□ 1
CDH11-206ENST00000562998 NFASCO94856 1347 aa21.29■■□□□ 1
CDH11-206ENST00000562998 LGALS2P05162 132 aa21.29■■□□□ 1
CDH11-206ENST00000562998 ZNF286BP0CG31 522 aa21.29■■□□□ 1
CDH11-206ENST00000562998 PSEN2P49810 448 aa21.29■■□□□ 1
CDH11-206ENST00000562998 LENG9Q96B70 501 aa21.29■■□□□ 1
CDH11-206ENST00000562998 ZSCAN31Q96LW9 406 aaPredicted RBP21.29■■□□□ 1
CDH11-206ENST00000562998 KATNAL1Q9BW62 490 aa21.29■■□□□ 1
CDH11-206ENST00000562998 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
CDH11-206ENST00000562998 AGO4Q9HCK5 861 aaKnown RBP21.29■■□□□ 1
CDH11-206ENST00000562998 TRMT13Q9NUP7 481 aaKnown RBP21.29■■□□□ 1
CDH11-206ENST00000562998 KCNJ14Q9UNX9 436 aa21.29■■□□□ 1
CDH11-206ENST00000562998 GSTTP1A0A1W2PQM5 241 aa21.28■■□□□ 1
CDH11-206ENST00000562998 JAK2O60674 1132 aa21.28■■□□□ 1
CDH11-206ENST00000562998 RAG1P15918 1043 aa21.28■■□□□ 1
CDH11-206ENST00000562998 USP11P51784 963 aa21.28■■□□□ 1
CDH11-206ENST00000562998 ITGB3BPQ13352 177 aaPredicted RBP21.28■■□□□ 1
CDH11-206ENST00000562998 MFSD10Q14728 455 aa21.28■■□□□ 1
CDH11-206ENST00000562998 PPP1R13LQ8WUF5 828 aa21.28■■□□□ 1
CDH11-206ENST00000562998 WASF1Q92558 559 aa21.28■■□□□ 1
CDH11-206ENST00000562998 LBHD1Q9BQE6 289 aaPredicted RBP21.28■■□□□ 1
CDH11-206ENST00000562998 ALG1Q9BT22 464 aa21.28■■□□□ 1
CDH11-206ENST00000562998 LAMA3Q16787 3333 aa21.27■■□□□ 1
CDH11-206ENST00000562998 H3BRB1 525 aa21.27■■□□□ 1
CDH11-206ENST00000562998 NOP56O00567 594 aaKnown RBP21.27■■□□□ 1
CDH11-206ENST00000562998 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
CDH11-206ENST00000562998 SUPT20HL2P0C7V6 817 aa21.27■■□□□ 1
CDH11-206ENST00000562998 HOXC8P31273 242 aa21.27■■□□□ 1
CDH11-206ENST00000562998 KIAA0753Q2KHM9 967 aa21.27■■□□□ 1
CDH11-206ENST00000562998 MFSD5Q6N075 450 aa21.27■■□□□ 1
CDH11-206ENST00000562998 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
CDH11-206ENST00000562998 NOC4LQ9BVI4 516 aaKnown RBP21.27■■□□□ 1
CDH11-206ENST00000562998 TUT1Q9H6E5 874 aaKnown RBP21.27■■□□□ 1
CDH11-206ENST00000562998 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
CDH11-206ENST00000562998 GTF2IRD1Q9UHL9 959 aa21.27■■□□□ 1
CDH11-206ENST00000562998 XBP1P17861 261 aa21.26■□□□□ 0.99
CDH11-206ENST00000562998 GDF6Q6KF10 455 aaPredicted RBP21.26■□□□□ 0.99
CDH11-206ENST00000562998 PLA2G4DQ86XP0 818 aa21.26■□□□□ 0.99
CDH11-206ENST00000562998 TBCKQ8TEA7 893 aa21.26■□□□□ 0.99
CDH11-206ENST00000562998 SEPT1Q8WYJ6 367 aa21.26■□□□□ 0.99
CDH11-206ENST00000562998 UBE2OQ9C0C9 1292 aaKnown RBP21.26■□□□□ 0.99
CDH11-206ENST00000562998 HDAC6Q9UBN7 1215 aa21.26■□□□□ 0.99
CDH11-206ENST00000562998 CYP3A7-CYP3A51PA0A087WV96 503 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 ATG7O95352 703 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 CYP3A7P24462 503 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 TCF7P36402 384 aaPredicted RBP21.25■□□□□ 0.99
CDH11-206ENST00000562998 ZNF76P36508 570 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 SETQ01105 290 aaPredicted RBP21.25■□□□□ 0.99
CDH11-206ENST00000562998 HIC1Q14526 733 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 FAM47CQ5HY64 1035 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 CCDC83Q8IWF9 413 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 OXER1Q8TDS5 423 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 TNFRSF25Q93038 417 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 MBOAT7Q96N66 472 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 HIPK3Q9H422 1215 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 JPH1Q9HDC5 661 aaPredicted RBP21.25■□□□□ 0.99
CDH11-206ENST00000562998 PKD2L1Q9P0L9 805 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 SLC9A2Q9UBY0 812 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 UMODL1Q5DID0 1318 aa21.25■□□□□ 0.99
CDH11-206ENST00000562998 LGR5O75473 907 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 CD2BP2O95400 341 aaKnown RBP21.24■□□□□ 0.99
CDH11-206ENST00000562998 CYP2C9P11712 490 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 EPHB4P54760 987 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 SP4Q02446 784 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 KRT25Q7Z3Z0 450 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 TRIM50Q86XT4 487 aa21.24■□□□□ 0.99
CDH11-206ENST00000562998 TDHQ8IZJ6 230 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms