RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 PGBD1Q96JS3 809 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 THAP9Q9H5L6 903 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 COL16A1Q07092 1604 aaPredicted RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 CHST13Q8NET6 341 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ZBTB9Q96C00 473 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 TAF6LQ9Y6J9 622 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 FDPSP14324 419 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 HOXA13P31271 388 aaPredicted RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 NFIAQ12857 509 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 EPHA7Q15375 998 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 CEP55Q53EZ4 464 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 USP17L6PQ6QN14 398 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ADGRA1Q86SQ6 560 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 PROM2Q8N271 834 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 TRIM6Q9C030 488 aaPredicted RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 NWD2Q9ULI1 1742 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 DDIT3P35638 169 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 ADAM9Q13443 819 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 ARMCX5Q6P1M9 558 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TCP11Q8WWU5 503 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.29□□□□□ -1.08
TCF4-216ENST00000562680 PFASO15067 1338 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 CTDNEP1O95476 244 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 P4HBP07237 508 aaKnown RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 TNFAIP3P21580 790 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 HMGCS2P54868 508 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 MTMR2Q13614 643 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 MAN2A1Q16706 1144 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 APOBEC3HQ6NTF7 200 aaKnown RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 OTUD5Q96G74 571 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 EPSTI1Q96J88 318 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 CEP170P1Q96L14 293 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TMEM39BQ9GZU3 492 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TUFT1Q9NNX1 390 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TBC1D7Q9P0N9 293 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 SEPT9Q9UHD8 586 aaPredicted RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 STAM2O75886 525 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 COPB1P53618 953 aaKnown RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 SLC8A3P57103 927 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 SURF1Q15526 300 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 SFMBT2Q5VUG0 894 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 FAM212AQ96EL1 285 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 SLC39A2Q9NP94 309 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 JADE2Q9NQC1 790 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 FANCLQ9NW38 375 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 XPOTO43592 962 aaKnown RBP8.29□□□□□ -1.08
TCF4-216ENST00000562680 KIAA0754O94854 1291 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 CLUL1Q15846 466 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 DBN1Q16643 649 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 PPP1R2P3Q6NXS1 205 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 CPVLQ9H3G5 476 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 GJB4Q9NTQ9 266 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 STRCQ7RTU9 1775 aa8.29□□□□□ -1.08
TCF4-216ENST00000562680 CTAGE15A4D2H0 777 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CTAGE8P0CG41 777 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 MCM6Q14566 821 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 KCNB1Q14721 858 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 DPCR1Q3MIW9 517 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CTAGE6Q86UF2 777 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 CTAGE4Q8IX94 777 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 DNAI1Q9UI46 699 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 MAD2L2Q9UI95 211 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 FBXO2Q9UK22 296 aaPredicted RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 KIF28PB7ZC32 967 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 FCER1AP12319 257 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 IBSPP21815 317 aaPredicted RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 GUCY1A2P33402 732 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 PSMC2P35998 433 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 LIN9Q5TKA1 542 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 MAEAQ7L5Y9 396 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 ERO1BQ86YB8 467 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RDM1Q8NG50 284 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RAD54LQ92698 747 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 FAM210AQ96ND0 272 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 PARK7Q99497 189 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 RIOX1Q9H6W3 641 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 SPEF2Q9C093 1822 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 A0A1B0GUA9 196 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RHBDL3P58872 404 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 UBXN2AP68543 259 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 TTBK2Q6IQ55 1244 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 SPATS2LQ9NUQ6 558 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 BZW2Q9Y6E2 419 aaKnown RBP8.28□□□□□ -1.08
TCF4-216ENST00000562680 LAMB4A4D0S4 1761 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RGPD2P0DJD1 1756 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 RGPD5Q99666 1765 aa8.28□□□□□ -1.08
TCF4-216ENST00000562680 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms