RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 EIF5P55010 431 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 PLEKHO1Q53GL0 409 aaPredicted RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 ENOX1Q8TC92 643 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 ASB11Q8WXH4 323 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 ZNF496Q96IT1 587 aaPredicted RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 PUS7Q96PZ0 661 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 GLIS2Q9BZE0 524 aaPredicted RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 SLC52A2Q9HAB3 445 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 DDX21Q9NR30 783 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBR1-203ENST00000562173 GPATCH2Q9NW75 528 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 R3HCC1Q9Y3T6 440 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 MRVI1Q9Y6F6 885 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
UBR1-203ENST00000562173 LTBP3Q9NS15 1303 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 SRGNP10124 158 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 NAT2P11245 290 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 SRFP11831 508 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
UBR1-203ENST00000562173 SLC7A5Q01650 507 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 PPP2R5EQ16537 467 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 FXNQ16595 210 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 NBPF9Q3BBW0 867 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 ANKRD39Q53RE8 183 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 CIAPIN1Q6FI81 312 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 TMPRSS7Q7RTY8 843 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 SYNE4Q8N205 404 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 ASCC2Q9H1I8 757 aaPredicted RBP7.34□□□□□ -1.23
UBR1-203ENST00000562173 HACL1Q9UJ83 578 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 ANGEL1Q9UNK9 670 aaKnown RBP7.34□□□□□ -1.23
UBR1-203ENST00000562173 SLC5A6Q9Y289 635 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 PCDHB12Q9Y5F1 795 aa7.34□□□□□ -1.23
UBR1-203ENST00000562173 SCN9AQ15858 1988 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 DLG5Q8TDM6 1919 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 IL13P35225 146 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 GP2P55259 537 aaKnown RBP7.33□□□□□ -1.24
UBR1-203ENST00000562173 HLFQ16534 295 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 ANKS3Q6ZW76 656 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
UBR1-203ENST00000562173 UBXN4Q92575 508 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
UBR1-203ENST00000562173 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
UBR1-203ENST00000562173 MKI67P46013 3256 aaKnown RBP7.33□□□□□ -1.24
UBR1-203ENST00000562173 KDM3BQ7LBC6 1761 aa7.33□□□□□ -1.24
UBR1-203ENST00000562173 KLF4O43474 513 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
UBR1-203ENST00000562173 AUHQ13825 339 aaKnown RBP7.32□□□□□ -1.24
UBR1-203ENST00000562173 C1orf141Q5JVX7 400 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 MCTP1Q6DN14 999 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 VHLLQ6RSH7 139 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 CCDC144CPQ8IYA2 1237 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 SYTL5Q8TDW5 730 aaPredicted RBP7.32□□□□□ -1.24
UBR1-203ENST00000562173 BRIP1Q9BX63 1249 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 SEMA3GQ9NS98 782 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 CCDC39Q9UFE4 941 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 USP16Q9Y5T5 823 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 PAPPA2Q9BXP8 1791 aa7.32□□□□□ -1.24
UBR1-203ENST00000562173 ZSWIM8A7E2V4 1837 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 ASTN2O75129 1339 aaPredicted RBP7.31□□□□□ -1.24
UBR1-203ENST00000562173 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 C9IYK1 514 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 SIGLEC6O43699 453 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 IARSP41252 1262 aaKnown RBP7.31□□□□□ -1.24
UBR1-203ENST00000562173 RBL2Q08999 1139 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 RAB33AQ14088 237 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 GAB4Q2WGN9 574 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 GNPTABQ3T906 1256 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 ANGEL2Q5VTE6 544 aaKnown RBP7.31□□□□□ -1.24
UBR1-203ENST00000562173 TSPYL5Q86VY4 417 aaPredicted RBP7.31□□□□□ -1.24
UBR1-203ENST00000562173 CNBD1Q8NA66 436 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 DAGLBQ8NCG7 672 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 IL17REQ8NFR9 667 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 KLHL6Q8WZ60 621 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 ZNF512BQ96KM6 892 aaPredicted RBP7.31□□□□□ -1.24
UBR1-203ENST00000562173 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 HAUS7Q99871 368 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 GBP3Q9H0R5 595 aa7.31□□□□□ -1.24
UBR1-203ENST00000562173 H3BS24 57 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 FZD9O00144 591 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 SHOXO15266 292 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 CELF2O95319 508 aaKnown RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBR1-203ENST00000562173 DDR2Q16832 855 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 AOC3Q16853 763 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 AXDND1Q5T1B0 1012 aaPredicted RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 CDKAL1Q5VV42 579 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 TDRD10Q5VZ19 366 aaKnown RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 ZNF655Q8N720 491 aaPredicted RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 AGBL5Q8NDL9 886 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 HNRNPLLQ8WVV9 542 aaKnown RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 KLHL25Q9H0H3 589 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
UBR1-203ENST00000562173 PANK3Q9H999 370 aa7.3□□□□□ -1.24
UBR1-203ENST00000562173 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms