RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 RAD51CO43502 376 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 MARCH6O60337 910 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 PPP1R37O75864 691 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 NOL4O94818 638 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 EPS15P42566 896 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 SEC24CP53992 1094 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 ORC2Q13416 577 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 MREGQ8N565 214 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 A0A087X0T9 212 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 FAM228BP0C875 321 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 PPARDQ03181 441 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 DDB1Q16531 1140 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 NELFCDQ8IXH7 590 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 ZNF473Q8WTR7 871 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 CEP89Q96ST8 783 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 MYH14Q7Z406 1995 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 KCNK3O14649 394 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 SETQ01105 290 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 COASYQ13057 564 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 PTGISQ16647 500 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 KCNV1Q6PIU1 500 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 CD302Q8IX05 232 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 COA7Q96BR5 231 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 ROBO3Q96MS0 1386 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 HMGB1P1B2RPK0 211 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 E7EVH7 732 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 MYO1FO00160 1098 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 CDK8P49336 464 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 FAM26FQ5R3K3 315 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 TBC1D9BQ66K14 1250 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 ARHGAP27Q6ZUM4 889 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 CNPY4Q8N129 248 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 USP38Q8NB14 1042 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 BMP2KQ9NSY1 1161 aaPredicted RBP15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 PANK4Q9NVE7 773 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 PCDHGC5Q9Y5F6 944 aa15.36■□□□□ 0.05
VPS9D1-202ENST00000561976 TNNI2P48788 182 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 ADCY7P51828 1080 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 GSTO1P78417 241 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 ASIC2Q16515 512 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 NLRP14Q86W24 1093 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 FRMPD2Q68DX3 1309 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 ATXN2Q99700 1313 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 PDIA5Q14554 519 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 PTPROQ16827 1216 aa15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 SWT1Q5T5J6 900 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 PRPF38AQ8NAV1 312 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 PPANQ9NQ55 473 aaKnown RBP15.35■□□□□ 0.05
VPS9D1-202ENST00000561976 CCDC88AQ3V6T2 1871 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 USP17L5A8MUK1 530 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 HDLBPQ00341 1268 aaKnown RBP15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 CCDC91Q7Z6B0 441 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 MYCBPAPQ8TBZ2 947 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 CABS1Q96KC9 395 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 ANKIB1Q9P2G1 1089 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 GCOM1H8Y6P7 765 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 CEP104O60308 925 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 CLSTN1O94985 981 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 MYZAPP0CAP1 466 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 GRIK5Q16478 980 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 ZCWPW2Q504Y3 356 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 GPATCH11Q8N954 259 aa15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 BCCIPQ9P287 314 aaKnown RBP eCLIP15.34■□□□□ 0.05
VPS9D1-202ENST00000561976 ESYT2A0FGR8 921 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 HSPA9P38646 679 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 KCNQ4P56696 695 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 IFT88Q13099 833 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 ITGB3BPQ13352 177 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 ECM1Q16610 540 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 TMEM119Q4V9L6 283 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 ARFGAP2Q8N6H7 521 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 NEDD1Q8NHV4 660 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 GJA10Q969M2 543 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 NCAPGQ9BPX3 1015 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 FSBPO95073 299 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 GNA14O95837 355 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 LDHCP07864 332 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 OR2W6PQ8NHA6 318 aa15.33■□□□□ 0.04
VPS9D1-202ENST00000561976 DNAJC19Q96DA6 116 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms