RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 CCDC178Q5BJE1 867 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 ANO7Q6IWH7 933 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 CNOT10Q9H9A5 744 aaKnown RBP20.41■□□□□ 0.86
RAB40C-206ENST00000561781 HEXIM1O94992 359 aaKnown RBP20.41■□□□□ 0.86
RAB40C-206ENST00000561781 GLI1P08151 1106 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 GNAQP50148 359 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 ALDH5A1P51649 535 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-206ENST00000561781 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-206ENST00000561781 CYB5R4Q7L1T6 521 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 MYL10Q9BUA6 226 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 ZCWPW1Q9H0M4 648 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 EHD2Q9NZN4 543 aa20.41■□□□□ 0.86
RAB40C-206ENST00000561781 QSER1Q2KHR3 1735 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 FLOT1O75955 427 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 ATP11AP98196 1134 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 GUCY2DQ02846 1103 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 CENPTQ96BT3 561 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 FAM89AQ96GI7 184 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 ZWILCHQ9H900 591 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 CAPN11Q9UMQ6 739 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 LRRC42Q9Y546 428 aa20.4■□□□□ 0.86
RAB40C-206ENST00000561781 BACH1O14867 736 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 CYP27A1Q02318 531 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 PPARDQ03181 441 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 SAFBQ15424 915 aaKnown RBP eCLIP20.39■□□□□ 0.86
RAB40C-206ENST00000561781 MEA1Q16626 185 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 RRAGBQ5VZM2 374 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 TRPM8Q7Z2W7 1104 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 NLRP10Q86W26 655 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 ZNF34Q8IZ26 560 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 MAIP1Q8WWC4 291 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 STAMQ92783 540 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 SETDB2Q96T68 719 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 PSMB7Q99436 277 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 FAM217BQ9NTX9 383 aaPredicted RBP20.39■□□□□ 0.86
RAB40C-206ENST00000561781 RBM12Q9NTZ6 932 aaKnown RBP20.39■□□□□ 0.86
RAB40C-206ENST00000561781 PCMTD2Q9NV79 361 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 RNF14Q9UBS8 474 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 RWDD2AQ9UIY3 292 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 PHF24Q9UPV7 400 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.86
RAB40C-206ENST00000561781 POLRMTO00411 1230 aaKnown RBP20.39■□□□□ 0.85
RAB40C-206ENST00000561781 ZBTB43O43298 467 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 CXCR5P32302 372 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 GUCY1A2P33402 732 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 LACTBP83111 547 aaPredicted RBP20.39■□□□□ 0.85
RAB40C-206ENST00000561781 NR5A1Q13285 461 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 ADAM9Q13443 819 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 SPICE1Q8N0Z3 855 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 TRAPPC9Q96Q05 1148 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 NHEJ1Q9H9Q4 299 aaPredicted RBP20.39■□□□□ 0.85
RAB40C-206ENST00000561781 ZNHIT6Q9NWK9 470 aaKnown RBP20.39■□□□□ 0.85
RAB40C-206ENST00000561781 VPS54Q9P1Q0 977 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
RAB40C-206ENST00000561781 USO1O60763 962 aaKnown RBP20.38■□□□□ 0.85
RAB40C-206ENST00000561781 ZNF131P52739 623 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 SSRP1Q08945 709 aaKnown RBP20.38■□□□□ 0.85
RAB40C-206ENST00000561781 PAK1Q13153 545 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 MYBPC3Q14896 1274 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 TRIM68Q6AZZ1 485 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 NFRKBQ6P4R8 1299 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 MB21D1Q8N884 522 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 CAPN6Q9Y6Q1 641 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 UPP2O95045 317 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 TM4SF1P30408 202 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 ZBED6P86452 979 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 FKBP4Q02790 459 aaKnown RBP eCLIP20.38■□□□□ 0.85
RAB40C-206ENST00000561781 EIF1ADQ8N9N8 165 aaKnown RBP20.38■□□□□ 0.85
RAB40C-206ENST00000561781 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 MTFR1LQ9H019 292 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 VCXQ9H320 206 aa20.38■□□□□ 0.85
RAB40C-206ENST00000561781 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-206ENST00000561781 WFS1O76024 890 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 KCNJ2P63252 427 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 ESYT3A0FGR9 886 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 E7ENQ6 273 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 PTGER2P43116 358 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 PSMC4P43686 418 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 SCNN1BP51168 640 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 CFAP221Q4G0U5 840 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 FAM133BQ5BKY9 247 aaKnown RBP20.37■□□□□ 0.85
RAB40C-206ENST00000561781 ERMARDQ5T6L9 678 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 PIGWQ7Z7B1 504 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 NELFBQ8WX92 580 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 LRRC45Q96CN5 670 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 CCDC97Q96F63 343 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-206ENST00000561781 INCENPQ9NQS7 918 aa20.37■□□□□ 0.85
RAB40C-206ENST00000561781 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.37■□□□□ 0.85
RAB40C-206ENST00000561781 AATFQ9NY61 560 aaKnown RBP eCLIP20.37■□□□□ 0.85
RAB40C-206ENST00000561781 CNOT8Q9UFF9 292 aaKnown RBP20.37■□□□□ 0.85
RAB40C-206ENST00000561781 A0A1W2PQC6 194 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 ZSCAN5CA6NGD5 496 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-206ENST00000561781 H0YGN5 161 aa20.36■□□□□ 0.85
RAB40C-206ENST00000561781 MYBL1P10243 752 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms