RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TELO2Q9Y4R8 837 aa23.66■■□□□ 1.38
TPM1-232ENST00000561425 SORBS3O60504 671 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 LGALS2P05162 132 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 SREBF1P36956 1147 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 HIC1Q14526 733 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 RPUSD2Q8IZ73 545 aaKnown RBP23.65■■□□□ 1.38
TPM1-232ENST00000561425 C7orf31Q8N865 590 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 PHKBQ93100 1093 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 MXRA8Q9BRK3 442 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 PDRG1Q9NUG6 133 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 MYH7BA7E2Y1 1941 aa23.65■■□□□ 1.38
TPM1-232ENST00000561425 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 H3BRB1 525 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 ADAMTS3O15072 1205 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 IQCF3P0C7M6 154 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 CCT2P78371 535 aaKnown RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 BFSP2Q13515 415 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 DHX38Q92620 1227 aaKnown RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 SCLYQ96I15 445 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 ALG1Q9BT22 464 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 ANO3Q9BYT9 981 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 TUT1Q9H6E5 874 aaKnown RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 NCOA5Q9HCD5 579 aaKnown RBP23.64■■□□□ 1.37
TPM1-232ENST00000561425 TMEM260Q9NX78 707 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 MTMR10Q9NXD2 777 aa23.64■■□□□ 1.37
TPM1-232ENST00000561425 FGBP02675 491 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 PFKMP08237 780 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 RFC2P35250 354 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 MTMR1Q13613 665 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 MCTP2Q6DN12 878 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 DEFB123Q8N688 67 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 CYP2W1Q8TAV3 490 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 CAGE1Q8TC20 777 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 CCDC12Q8WUD4 166 aaPredicted RBP23.63■■□□□ 1.37
TPM1-232ENST00000561425 GTF3C3Q9Y5Q9 886 aa23.63■■□□□ 1.37
TPM1-232ENST00000561425 MEIS1O00470 390 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 NOP56O00567 594 aaKnown RBP23.62■■□□□ 1.37
TPM1-232ENST00000561425 EIF5BO60841 1220 aaKnown RBP23.62■■□□□ 1.37
TPM1-232ENST00000561425 CYP3A4P08684 503 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 CHMP4BP1P59074 171 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 GPNMBQ14956 572 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 TRIM71Q2Q1W2 868 aaKnown RBP23.62■■□□□ 1.37
TPM1-232ENST00000561425 Q7L0L9 218 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 PGBD1Q96JS3 809 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 C6orf50Q9HD87 102 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 SH3GLB2Q9NR46 395 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 KCNH7Q9NS40 1196 aa23.62■■□□□ 1.37
TPM1-232ENST00000561425 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 PTK7Q13308 1070 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 CEP55Q53EZ4 464 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 NIPA1Q7RTP0 329 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 RETREG2Q8NC44 543 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 AFAP1L1Q8TED9 768 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
TPM1-232ENST00000561425 SLC26A6Q9BXS9 759 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 NOD1Q9Y239 953 aa23.61■■□□□ 1.37
TPM1-232ENST00000561425 NFASCO94856 1347 aa23.6■■□□□ 1.37
TPM1-232ENST00000561425 GNA11P29992 359 aa23.6■■□□□ 1.37
TPM1-232ENST00000561425 ARHGAP4P98171 946 aa23.6■■□□□ 1.37
TPM1-232ENST00000561425 AKAP17AQ02040 695 aaKnown RBP23.6■■□□□ 1.37
TPM1-232ENST00000561425 SEPT1Q8WYJ6 367 aa23.6■■□□□ 1.37
TPM1-232ENST00000561425 CXXC1Q9P0U4 656 aaPredicted RBP23.6■■□□□ 1.37
TPM1-232ENST00000561425 SEC24BO95487 1268 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 ARP10275 920 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 ADAM17P78536 824 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 ZNF200P98182 395 aaPredicted RBP23.59■■□□□ 1.37
TPM1-232ENST00000561425 JAKMIP3Q5VZ66 844 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 TRAF7Q6Q0C0 670 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 SERINC5Q86VE9 423 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 CCDC155Q8N6L0 562 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 RNPEPQ9H4A4 650 aa23.59■■□□□ 1.37
TPM1-232ENST00000561425 IGLV3-22A0A075B6J6 115 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 TMEM265A0A087WTH1 108 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 EDIL3O43854 480 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 PARNO95453 639 aaKnown RBP23.58■■□□□ 1.37
TPM1-232ENST00000561425 SMIM10L2AP0DMW4 78 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 SMIM10L2BP0DMW5 78 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 CKBP12277 381 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 SELPP16109 830 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 FAM177A1Q8N128 213 aaPredicted RBP23.58■■□□□ 1.37
TPM1-232ENST00000561425 REXO1Q8N1G1 1221 aaKnown RBP23.58■■□□□ 1.37
TPM1-232ENST00000561425 CCDC148Q8NFR7 591 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 WNT8BQ93098 351 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 SEMA6BQ9H3T3 888 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 AGO4Q9HCK5 861 aaKnown RBP23.58■■□□□ 1.37
TPM1-232ENST00000561425 TPCN1Q9ULQ1 816 aa23.58■■□□□ 1.37
TPM1-232ENST00000561425 FAM86B1E9PN63 330 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 PPFIA3O75145 1194 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 FAM86B2P0C5J1 330 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 TCF7P36402 384 aaPredicted RBP23.57■■□□□ 1.36
TPM1-232ENST00000561425 SSRP1Q08945 709 aaKnown RBP23.57■■□□□ 1.36
TPM1-232ENST00000561425 OTOP2Q7RTS6 562 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 TRIM50Q86XT4 487 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 TRIM22Q8IYM9 498 aa23.57■■□□□ 1.36
TPM1-232ENST00000561425 TTYH1Q9H313 450 aaPredicted RBP23.57■■□□□ 1.36
TPM1-232ENST00000561425 C17orf102A2RUQ5 167 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 PFKFB2O60825 505 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 LGR5O75473 907 aa23.56■■□□□ 1.36
TPM1-232ENST00000561425 ATG7O95352 703 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms