RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
ZEB1-223ENST00000561304 ERICH2A1L162 156 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 A6NJR5 290 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 TLR3O15455 904 aaKnown RBP8.59□□□□□ -1.03
ZEB1-223ENST00000561304 ZEB2O60315 1214 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 CABYRO75952 493 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 MMP3P08254 477 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 GCGRP47871 477 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 CPT1AP50416 773 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 TTLL4Q14679 1199 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 TMEM240Q5SV17 173 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
ZEB1-223ENST00000561304 NSUN6Q8TEA1 469 aaKnown RBP8.59□□□□□ -1.03
ZEB1-223ENST00000561304 AFG1LQ8WV93 481 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
ZEB1-223ENST00000561304 MTG1Q9BT17 334 aaPredicted RBP8.59□□□□□ -1.03
ZEB1-223ENST00000561304 HIPK3Q9H422 1215 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 ANO2Q9NQ90 1003 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 POLR3EQ9NVU0 708 aa8.59□□□□□ -1.03
ZEB1-223ENST00000561304 PNMA6FA0A0J9YX94 578 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 GRXCR1A8MXD5 290 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 NKRFO15226 690 aaKnown RBP eCLIP8.58□□□□□ -1.044e-7■■■□□ 16
ZEB1-223ENST00000561304 SORBS3O60504 671 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 DDAH1O94760 285 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 NR3C2P08235 984 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 CYP2C9P11712 490 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 MYCLP12524 364 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 CCL23P55773 120 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 COPS2P61201 443 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 SMAD3P84022 425 aaKnown RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 PPIGQ13427 754 aaKnown RBP eCLIP8.58□□□□□ -1.043e-7■■■■■ 28.4
ZEB1-223ENST00000561304 SART3Q15020 963 aaKnown RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 PGM5Q15124 567 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 STXBP2Q15833 593 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 AMHR2Q16671 573 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 ARHGEF16Q5VV41 709 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 BLOC1S3Q6QNY0 202 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 CATIPQ7Z7H3 387 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 SRBD1Q8N5C6 995 aaKnown RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 KAT2BQ92831 832 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 SCLYQ96I15 445 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 CTAGE1Q96RT6 745 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 IWS1Q96ST2 819 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 PDCD2LQ9BRP1 358 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 MAF1Q9H063 256 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 BCAS3Q9H6U6 928 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 CXXC1Q9P0U4 656 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
ZEB1-223ENST00000561304 STXBP5LQ9Y2K9 1186 aa8.58□□□□□ -1.04
ZEB1-223ENST00000561304 FRMPD4Q14CM0 1322 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ATG2AQ2TAZ0 1938 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 NLRC5Q86WI3 1866 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 NR1I2O75469 434 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 GH1P01241 217 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ZNF286BP0CG31 522 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 CD46P15529 392 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 MCM5P33992 734 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 SP2Q02086 613 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ADCK5Q3MIX3 580 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 FAM47CQ5HY64 1035 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 CASC1Q6TDU7 716 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ZNF365Q70YC5 407 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 TMEM199Q8N511 208 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 SPZ1Q9BXG8 430 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 IL23AQ9NPF7 189 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 TELO2Q9Y4R8 837 aa8.57□□□□□ -1.04
ZEB1-223ENST00000561304 B4DLN1 442 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 EIF3JO75822 258 aaKnown RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MRPS9P82933 396 aaKnown RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 SEMA3FQ13275 785 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 NFRKBQ6P4R8 1299 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 PSRC1Q6PGN9 363 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MYLIPQ8WY64 445 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 TMEM87BQ96K49 555 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MAP3K14Q99558 947 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 MUC3AQ02505 3323 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
ZEB1-223ENST00000561304 CCDC69A6NI79 296 aa8.55□□□□□ -1.04
ZEB1-223ENST00000561304 GCOM1H8Y6P7 765 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-223ENST00000561304 MEIS2O14770 477 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms