RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 FGD1P98174 961 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 PFKFB3Q16875 520 aaPredicted RBP14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 PPP1R18Q6NYC8 613 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 METTL7BQ6UX53 244 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 HERVK_113Q902F9 699 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 UIMC1Q96RL1 719 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 MLXIPQ9HAP2 919 aa14.53□□□□□ -0.08
CHRNA3-208ENST00000561128 SMCO2A6NFE2 343 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 EDIL3O43854 480 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 IQCF3P0C7M6 154 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 ARP10275 920 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 TGFB3P10600 412 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 DNAJB2P25686 324 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 HOXC8P31273 242 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 MBTPS1Q14703 1052 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 ERICH6BQ5W0A0 696 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 PSRC1Q6PGN9 363 aaPredicted RBP14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 KCNV1Q6PIU1 500 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 CRYGNQ8WXF5 182 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 AIFM3Q96NN9 605 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 PBX4Q9BYU1 374 aa14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 YBX2Q9Y2T7 364 aaKnown RBP14.52□□□□□ -0.09
CHRNA3-208ENST00000561128 GSTTP1A0A1W2PQM5 241 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 SPDYE3A6NKU9 549 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 STAM2O75886 525 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 SMIM10L2AP0DMW4 78 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 SMIM10L2BP0DMW5 78 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 MYOGP15173 224 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 RABGGTBP53611 331 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 JAKMIP3Q5VZ66 844 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 GPRASP2Q96D09 838 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 ZBTB10Q96DT7 871 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 PCYT2Q99447 389 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 SEZ6LQ9BYH1 1024 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 JADE2Q9NQC1 790 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 VPS54Q9P1Q0 977 aa14.51□□□□□ -0.09
CHRNA3-208ENST00000561128 FAM86B1E9PN63 330 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 H3BRB1 525 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 PRPF3O43395 683 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 NBNO60934 754 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 PPFIA4O75335 1185 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 LARGE1O95461 756 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 CENPBP07199 599 aaPredicted RBP14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 FAM86B2P0C5J1 330 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 CKBP12277 381 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 PSMA5P28066 241 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 SREBF1P36956 1147 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 RBL2Q08999 1139 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 STK3Q13188 491 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 MTMR1Q13613 665 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 ZNF697Q5TEC3 545 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 XRRA1Q6P2D8 792 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 TMCO2Q7Z6W1 182 aaPredicted RBP14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 C7orf31Q8N865 590 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 SLC26A6Q9BXS9 759 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 TM6SF1Q9BZW5 370 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 SEMA6BQ9H3T3 888 aa14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 TUT1Q9H6E5 874 aaKnown RBP14.5□□□□□ -0.09
CHRNA3-208ENST00000561128 IGLV3-22A0A075B6J6 115 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 ESYT2A0FGR8 921 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 NOP56O00567 594 aaKnown RBP14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 TREHO43280 583 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 FGBP02675 491 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 IFNAR1P17181 557 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 MARK3P27448 753 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 TCF7P36402 384 aaPredicted RBP14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 ARHGAP4P98171 946 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 NEDD9Q14511 834 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 NPY5RQ15761 445 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 ZNF618Q5T7W0 954 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 LRRC8DQ7L1W4 858 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 SPRED2Q7Z698 418 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 NLRX1Q86UT6 975 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 MYLIPQ8WY64 445 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 CDX2Q99626 313 aaPredicted RBP14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 SENP7Q9BQF6 1050 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 MXRA8Q9BRK3 442 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 KATNAL1Q9BW62 490 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 ZMYND12Q9H0C1 365 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 RNPEPQ9H4A4 650 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 SETD4Q9NVD3 440 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 NOD1Q9Y239 953 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 CYP46A1Q9Y6A2 500 aa14.49□□□□□ -0.09
CHRNA3-208ENST00000561128 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 hCG_1984214I3L0E3 225 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 CCNE2O96020 404 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 ADAM17P78536 824 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 GRIN2CQ14957 1233 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 RUFY4Q6ZNE9 571 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 SERINC5Q86VE9 423 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 ZNF713Q8N859 430 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms