RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 MROH7Q68CQ1 1323 aa17.44■□□□□ 0.38
SNRPA1-213ENST00000560856 IGLV3-22A0A075B6J6 115 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 FAM86B1E9PN63 330 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 JAK2O60674 1132 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 FAM86B2P0C5J1 330 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 ARP10275 920 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 MTMR1Q13613 665 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 NIPA1Q7RTP0 329 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 GPR20Q99678 358 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 C16orf70Q9BSU1 422 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SNRPA1-213ENST00000560856 DOCK5Q9H7D0 1870 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 B4GALT4O60513 344 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 F2P00734 622 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 CIITAP33076 1130 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 BMP8BP34820 402 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 GALNT17Q6IS24 598 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 NFRKBQ6P4R8 1299 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 BLIDQ8IZY5 108 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 TMEM39AQ9NV64 488 aa17.42■□□□□ 0.38
SNRPA1-213ENST00000560856 ZNF286BP0CG31 522 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 PSEN2P49810 448 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 SESTD1Q86VW0 696 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 GIMAP8Q8ND71 665 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 CTAGE1Q96RT6 745 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 AGO4Q9HCK5 861 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 LTBP2Q14767 1821 aa17.41■□□□□ 0.38
SNRPA1-213ENST00000560856 GSTTP1A0A1W2PQM5 241 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 CD2BP2O95400 341 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 LGALS2P05162 132 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 ITGB3BPQ13352 177 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 OXER1Q8TDS5 423 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 BADQ92934 168 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 LENG9Q96B70 501 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 PKD2L1Q9P0L9 805 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 NFASCO94856 1347 aa17.4■□□□□ 0.38
SNRPA1-213ENST00000560856 TLR3O15455 904 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 TIMP1P01033 207 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 ZNF76P36508 570 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 USP11P51784 963 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 MFSD10Q14728 455 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 HABP4Q5JVS0 413 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 IL27Q8NEV9 243 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 TBCKQ8TEA7 893 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 WASF1Q92558 559 aa17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
SNRPA1-213ENST00000560856 NOP56O00567 594 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 RAG1P15918 1043 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 SP4Q02446 784 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 HIC1Q14526 733 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 FAM47CQ5HY64 1035 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 SEPT1Q8WYJ6 367 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 TNFRSF25Q93038 417 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 LBHD1Q9BQE6 289 aaPredicted RBP17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 NOC4LQ9BVI4 516 aaKnown RBP17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 HDAC6Q9UBN7 1215 aa17.38■□□□□ 0.37
SNRPA1-213ENST00000560856 CYP3A7-CYP3A51PA0A087WV96 503 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 H3BRB1 525 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 XBP1P17861 261 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 CYP3A7P24462 503 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 HOXC8P31273 242 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 GDF6Q6KF10 455 aaPredicted RBP17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 TRIM50Q86XT4 487 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 MBOAT7Q96N66 472 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 PCYT2Q99447 389 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 KATNAL1Q9BW62 490 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 TUT1Q9H6E5 874 aaKnown RBP17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 GTF2IRD1Q9UHL9 959 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
SNRPA1-213ENST00000560856 A0A1W2PPC1 479 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 LGR5O75473 907 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 ATG7O95352 703 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 CCNE2O96020 404 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 CYP2C9P11712 490 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 CYP2C18P33260 490 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 TCF7P36402 384 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 EPHB4P54760 987 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 PRR16Q569H4 304 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 EARS2Q5JPH6 523 aaKnown RBP17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 MFSD5Q6N075 450 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 KRT25Q7Z3Z0 450 aa17.36■□□□□ 0.37
SNRPA1-213ENST00000560856 UIMC1Q96RL1 719 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms