RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SEPT8Q92599 483 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 MSLNLQ96KJ4 702 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 MAF1Q9H063 256 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 FAM86C1Q9NVL1 165 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 LAMA4Q16363 1823 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 ADGRA3Q8IWK6 1321 aa11.6□□□□□ -0.55
TPM1-225ENST00000560679 STXBP3O00186 592 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 NCK2O43639 380 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 EIF3JO75822 258 aaKnown RBP11.59□□□□□ -0.55
TPM1-225ENST00000560679 GGPS1O95749 300 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 NR3C2P08235 984 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 SMIM10L2AP0DMW4 78 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 SMIM10L2BP0DMW5 78 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 SP2Q02086 613 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 QRICH1Q2TAL8 776 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
TPM1-225ENST00000560679 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
TPM1-225ENST00000560679 ARHGEF16Q5VV41 709 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 TBC1D10CQ8IV04 446 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 FIBCD1Q8N539 461 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 IL31RAQ8NI17 732 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.55
TPM1-225ENST00000560679 CLP1Q92989 425 aaKnown RBP11.59□□□□□ -0.55
TPM1-225ENST00000560679 ATP6V0A1Q93050 837 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 PBXIP1Q96AQ6 731 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 LMAN2LQ9H0V9 348 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 CHMP4BQ9H444 224 aaKnown RBP11.59□□□□□ -0.55
TPM1-225ENST00000560679 CD207Q9UJ71 328 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 NEDD4P46934 1319 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 SALL3Q9BXA9 1300 aa11.59□□□□□ -0.55
TPM1-225ENST00000560679 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 C17orf102A2RUQ5 167 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 LOC730098B7Z3J9 87 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 CAND2O75155 1236 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 PPFIA4O75335 1185 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 EYA4O95677 639 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 FGAP02671 866 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 MMP1P03956 469 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 RB1P06400 928 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 BMPR1AP36894 532 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 VCPP55072 806 aaKnown RBP11.58□□□□□ -0.56
TPM1-225ENST00000560679 HAND2P61296 217 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 ZXDAP98168 799 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 ADGRF4Q8IZF3 695 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 IL17RAQ96F46 866 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 PDCD2LQ9BRP1 358 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
TPM1-225ENST00000560679 BCAS3Q9H6U6 928 aa11.58□□□□□ -0.56
TPM1-225ENST00000560679 CACNA1AO00555 2505 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 A0A0D9SFI3 127 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 GFRA3O60609 400 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 GLP2RO95838 553 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 LGALS2P05162 132 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 DNAJB1P25685 340 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 HSD17B4P51659 736 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 GHRHRQ02643 423 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 ADAM15Q13444 863 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 CBX2Q14781 532 aaPredicted RBP11.57□□□□□ -0.56
TPM1-225ENST00000560679 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
TPM1-225ENST00000560679 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 FBXL6Q8N531 539 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 SMRP1Q8NCR6 262 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 ASIC4Q96FT7 647 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 FAM227BQ96M60 508 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 TTC14Q96N46 770 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 ZKSCAN3Q9BRR0 538 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 RNPEPQ9H4A4 650 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 CLEC1BQ9P126 229 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
TPM1-225ENST00000560679 H3BRB1 525 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 PPP1R11O60927 126 aaPredicted RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 CFBP00751 764 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 HSPD1P10809 573 aaKnown RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 MX1P20591 662 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 NDUFV1P49821 464 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 ADAM17P78536 824 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 ADGRD2Q7Z7M1 963 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 TRIM50Q86XT4 487 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 APBB2Q92870 758 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 PRRX2Q99811 253 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 TUT1Q9H6E5 874 aaKnown RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 JMJD4Q9H9V9 463 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
TPM1-225ENST00000560679 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
TPM1-225ENST00000560679 TTC3P53804 2025 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 MYCLP12524 364 aaPredicted RBP11.55□□□□□ -0.56
TPM1-225ENST00000560679 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
TPM1-225ENST00000560679 PGM5Q15124 567 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 PKN1Q16512 942 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 FAM26DQ5JW98 314 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 STOX1Q6ZVD7 989 aa11.55□□□□□ -0.56
TPM1-225ENST00000560679 VSIG10LQ86VR7 867 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms