RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 FOXP4Q8IVH2 680 aaPredicted RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ZSCAN29Q8IWY8 852 aaPredicted RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ZFPM1Q8IX07 1006 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 IFT20Q8IY31 132 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 STK11IPQ8N1F8 1099 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ANKS1AQ92625 1134 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 SECISBP2LQ93073 1101 aaKnown RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 CAVIN3Q969G5 261 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 JAKMIP2Q96AA8 810 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 WNK4Q96J92 1243 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 CABS1Q96KC9 395 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 EDEM3Q9BZQ6 932 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 ELP3Q9H9T3 547 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 MKNK2Q9HBH9 465 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 SAMSN1Q9NSI8 373 aaKnown RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 MKI67P46013 3256 aaKnown RBP9.47□□□□□ -0.89
CCDC33-209ENST00000560565 PLIN4Q96Q06 1357 aa9.47□□□□□ -0.89
CCDC33-209ENST00000560565 MANSC4A6NHS7 340 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 LGALS16A8MUM7 142 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 FANCGO15287 622 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 PPFIA3O75145 1194 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC172P0C7W6 258 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 BMP6P22004 513 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 MNAT1P51948 309 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 ZBED6P86452 979 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 AMPD3Q01432 767 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 UBXN1Q04323 297 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 PICALMQ13492 652 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 COL9A3Q14050 684 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 VGLL4Q14135 290 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 SEC23AQ15436 765 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 MEA1Q16626 185 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 EMC10Q5UCC4 262 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 RRAGBQ5VZM2 374 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 GALNT17Q6IS24 598 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CATIPQ7Z7H3 387 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC84Q86UT8 332 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 DGKHQ86XP1 1220 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 ZNF444Q8N0Y2 327 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 BCAS4Q8TDM0 211 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 OPTNQ96CV9 577 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 DHTKD1Q96HY7 919 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CLIC6Q96NY7 704 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 WRNIP1Q96S55 665 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
CCDC33-209ENST00000560565 LRRC27Q9C0I9 530 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 ZSWIM4Q9H7M6 989 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 TNKSO95271 1327 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 ATRNL1Q5VV63 1379 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 OTOFQ9HC10 1997 aa9.46□□□□□ -0.9
CCDC33-209ENST00000560565 GRID2IPA4D2P6 1211 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 TSPY2A6NKD2 308 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 LRRIQ3A6PVS8 624 aaPredicted RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 CHUKO15111 745 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 PRPF3O43395 683 aaKnown RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 DDAH1O94760 285 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 FSBPO95073 299 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 SYF2O95926 243 aaKnown RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 ERCC3P19447 782 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 GSCP56915 257 aaPredicted RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 GABPAQ06546 454 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 PAK2Q13177 524 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 ORC2Q13416 577 aaPredicted RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 SLMAPQ14BN4 828 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 KRT31Q15323 416 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 CLUL1Q15846 466 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 FOXR2Q6PJQ5 311 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 PPP4R3CPQ6ZMV5 832 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 APTXQ7Z2E3 356 aaKnown RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 CROCCP2Q86T23 111 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 CNPY4Q8N129 248 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 GIMAP7Q8NHV1 300 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 NEDD1Q8NHV4 660 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 ZKSCAN4Q969J2 545 aaPredicted RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 CCDC17Q96LX7 622 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 SH3GL2Q99962 352 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 SELENOOQ9BVL4 669 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 DDX4Q9NQI0 724 aaKnown RBP9.45□□□□□ -0.9
CCDC33-209ENST00000560565 PI4KBQ9UBF8 816 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 RAPGEFL1Q9UHV5 662 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 SERPINB13Q9UIV8 391 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 GUCA1BQ9UMX6 200 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 HYOU1Q9Y4L1 999 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
CCDC33-209ENST00000560565 VCANP13611 3396 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 DDTLA6NHG4 134 aaPredicted RBP9.44□□□□□ -0.9
CCDC33-209ENST00000560565 BTBD18B2RXH4 712 aa9.44□□□□□ -0.9
CCDC33-209ENST00000560565 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms