RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 FIBPO43427 364 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 STAM2O75886 525 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 PARNO95453 639 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 POU3F3P20264 500 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 KCNJ6P48051 423 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 GNPTABQ3T906 1256 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 PCNX4Q63HM2 1172 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 KRT40Q6A162 431 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 SRBD1Q8N5C6 995 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 CTCFLQ8NI51 663 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 ATXN2LQ8WWM7 1075 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 CERS4Q9HA82 394 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 MTCH2Q9Y6C9 303 aa11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 TCF20Q9UGU0 1960 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-212ENST00000560496 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 LPXNO60711 386 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 SMIM10L2AP0DMW4 78 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 SMIM10L2BP0DMW5 78 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 KIF5BP33176 963 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 MICALL1Q8N3F8 863 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 TMEM87BQ96K49 555 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 ASB2Q96Q27 587 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 GPR20Q99678 358 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 MLXIPQ9HAP2 919 aa11.71□□□□□ -0.53
SNRPA1-212ENST00000560496 KAT6AQ92794 2004 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 WDR81Q562E7 1941 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 C17orf102A2RUQ5 167 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 H3BRB1 525 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 TREHO43280 583 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 TLL1O43897 1013 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 GJB5O95377 273 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 MCM5P33992 734 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 LIFRP42702 1097 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 ADAM17P78536 824 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 UBE2SQ16763 222 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 TMTC3Q6ZXV5 915 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 ARNTL2Q8WYA1 636 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 LRRC2Q9BYS8 371 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 OSBPL7Q9BZF2 842 aa11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 TUT1Q9H6E5 874 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-212ENST00000560496 EMSYQ7Z589 1322 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 ABHD14A-ACY1A0A1B0GW23 586 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 hCG_1642624A0A1W2PR95 340 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 CCDC69A6NI79 296 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 LGR5O75473 907 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 KCNA2P16389 499 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 GRB10Q13322 594 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 NEDD9Q14511 834 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 BMP2KLQ5H9B9 411 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 SENP7Q9BQF6 1050 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
SNRPA1-212ENST00000560496 LINC01553A4QN01 128 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 RSPH10B2B2RC85 870 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 KIF28PB7ZC32 967 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 EFCAB14O75071 495 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 CAND2O75155 1236 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 RSPH10BP0C881 870 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 CALM1P0DP23 149 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 CALM2P0DP24 149 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 CALM3P0DP25 149 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 ITGB5P18084 799 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 THPOP40225 353 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 GNAQP50148 359 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 MRPS5P82675 430 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 TFF2Q03403 129 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 XRRA1Q6P2D8 792 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 APOA5Q6Q788 366 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.68□□□□□ -0.547e-6■□□□□ 8.4
SNRPA1-212ENST00000560496 NFXL1Q6ZNB6 911 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 DBF4BQ8NFT6 615 aa11.68□□□□□ -0.54
SNRPA1-212ENST00000560496 LMBR1Q8WVP7 490 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms