RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 LGALS2P05162 132 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 CKBP12277 381 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 ADCY7P51828 1080 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 NAPAP54920 295 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 MTMR1Q13613 665 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 NKX2-4Q9H2Z4 354 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 CUL9Q8IWT3 2517 aa16.14■□□□□ 0.17
TPM1-223ENST00000560445 PBX2P40425 430 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
TPM1-223ENST00000560445 SP2Q02086 613 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 IKBKEQ14164 716 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 BLOC1S2Q6QNY1 142 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 SERINC5Q86VE9 423 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
TPM1-223ENST00000560445 ATP6V0A1Q93050 837 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 GPR20Q99678 358 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 LRRC2Q9BYS8 371 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
TPM1-223ENST00000560445 NAP1L2Q9ULW6 460 aaPredicted RBP16.13■□□□□ 0.17
TPM1-223ENST00000560445 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
TPM1-223ENST00000560445 MYO9BQ13459 2157 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
TPM1-223ENST00000560445 CXCL10P02778 98 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 METAP2P50579 478 aaKnown RBP eCLIP16.12■□□□□ 0.17
TPM1-223ENST00000560445 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
TPM1-223ENST00000560445 RSPH3Q86UC2 560 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 CCDC82Q8N4S0 544 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 SCN5AQ14524 2016 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 GBF1Q92538 1859 aa16.12■□□□□ 0.17
TPM1-223ENST00000560445 RSPH10B2B2RC85 870 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 SORBS3O60504 671 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 EIF5BO60841 1220 aaKnown RBP16.11■□□□□ 0.17
TPM1-223ENST00000560445 RSPH10BP0C881 870 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 SMIM10L2AP0DMW4 78 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 SMIM10L2BP0DMW5 78 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 THPOP40225 353 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 TAF2Q6P1X5 1199 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 CMTR1Q8N1G2 835 aaKnown RBP16.11■□□□□ 0.17
TPM1-223ENST00000560445 SEPT1Q8WYJ6 367 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 PRDM12Q9H4Q4 367 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 ERAP1Q9NZ08 941 aa16.11■□□□□ 0.17
TPM1-223ENST00000560445 TLL1O43897 1013 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 LGR5O75473 907 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 HOXC8P31273 242 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 HSPA4P34932 840 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 WWC2Q6AWC2 1192 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 DHX38Q92620 1227 aaKnown RBP16.1■□□□□ 0.17
TPM1-223ENST00000560445 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
TPM1-223ENST00000560445 KCNB2Q92953 911 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 JAKMIP1Q96N16 626 aaKnown RBP16.1■□□□□ 0.17
TPM1-223ENST00000560445 CTAGE1Q96RT6 745 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 SMARCAD1Q9H4L7 1026 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 JPH1Q9HDC5 661 aaPredicted RBP16.1■□□□□ 0.17
TPM1-223ENST00000560445 TCEAL9Q9UHQ7 104 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 YBX2Q9Y2T7 364 aaKnown RBP16.1■□□□□ 0.17
TPM1-223ENST00000560445 UBIAD1Q9Y5Z9 338 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 V9GY48 417 aaPredicted RBP16.1■□□□□ 0.17
TPM1-223ENST00000560445 KAT6AQ92794 2004 aa16.1■□□□□ 0.17
TPM1-223ENST00000560445 AMHP03971 560 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 IGFBP4P22692 258 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 TCF7P36402 384 aaPredicted RBP16.09■□□□□ 0.17
TPM1-223ENST00000560445 RABGGTBP53611 331 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
TPM1-223ENST00000560445 SP4Q02446 784 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 SEMA3FQ13275 785 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 UBE2SQ16763 222 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
TPM1-223ENST00000560445 FAM43BQ6ZT52 329 aaPredicted RBP16.09■□□□□ 0.17
TPM1-223ENST00000560445 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 SEPT8Q92599 483 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 APBB2Q92870 758 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 GLG1Q92896 1179 aa16.09■□□□□ 0.17
TPM1-223ENST00000560445 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
TPM1-223ENST00000560445 hCG_1642624A0A1W2PR95 340 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 ESYT2A0FGR8 921 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 CA3P07451 260 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 KCNA2P16389 499 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 ITGB5P18084 799 aa16.08■□□□□ 0.16
TPM1-223ENST00000560445 GNA11P29992 359 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms