RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TRAF7Q6Q0C0 670 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 METTL7BQ6UX53 244 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 SERINC5Q86VE9 423 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 ZNF654Q8IZM8 581 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 TMTC2Q8N394 836 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 IGDCC4Q8TDY8 1250 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 ARNTL2Q8WYA1 636 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 RRP36Q96EU6 259 aaKnown RBP15.63■□□□□ 0.09
SMAD3-214ENST00000560402 TMEM87BQ96K49 555 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 ZBED2Q9BTP6 218 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 LY9Q9HBG7 655 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 SENP2Q9HC62 589 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 COG5Q9UP83 839 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 TAF6LQ9Y6J9 622 aa15.63■□□□□ 0.09
SMAD3-214ENST00000560402 H3BRB1 525 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 LGR5O75473 907 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 LGALS2P05162 132 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 DEFB103AP81534 67 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 UHRF1Q96T88 793 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-214ENST00000560402 RAD9AQ99638 391 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 SENP7Q9BQF6 1050 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 USP26Q9BXU7 913 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 TUT1Q9H6E5 874 aaKnown RBP15.62■□□□□ 0.09
SMAD3-214ENST00000560402 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
SMAD3-214ENST00000560402 ZNF215Q9UL58 517 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-214ENST00000560402 EPOPA6NHQ4 379 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 SPATA31C2B4DYI2 1134 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 ARHGEF15O94989 841 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 CALM1P0DP23 149 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 CALM2P0DP24 149 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 CALM3P0DP25 149 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 GNAT1P11488 350 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 MCM5P33992 734 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 MRPS9P82933 396 aaKnown RBP15.61■□□□□ 0.09
SMAD3-214ENST00000560402 SKIV2LQ15477 1246 aaKnown RBP15.61■□□□□ 0.09
SMAD3-214ENST00000560402 PCNX4Q63HM2 1172 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 GIMAP8Q8ND71 665 aaPredicted RBP15.61■□□□□ 0.09
SMAD3-214ENST00000560402 SMARCC2Q8TAQ2 1214 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
SMAD3-214ENST00000560402 ATP6V0A1Q93050 837 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 WNT8BQ93098 351 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 C22orf23Q9BZE7 217 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 CERS4Q9HA82 394 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 RALGAPA2Q2PPJ7 1873 aa15.61■□□□□ 0.09
SMAD3-214ENST00000560402 CCDC69A6NI79 296 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 RSPH10B2B2RC85 870 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-214ENST00000560402 PRC1O43663 620 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 SORBS3O60504 671 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 RSPH10BP0C881 870 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 SMIM10L2AP0DMW4 78 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 SMIM10L2BP0DMW5 78 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 ZNF200P98182 395 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-214ENST00000560402 GRB10Q13322 594 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 MBTPS1Q14703 1052 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 NLRX1Q86UT6 975 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 CDHR1Q96JP9 859 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 TGS1Q96RS0 853 aaKnown RBP15.6■□□□□ 0.09
SMAD3-214ENST00000560402 NLRC5Q86WI3 1866 aa15.6■□□□□ 0.09
SMAD3-214ENST00000560402 XIRP2A4UGR9 3374 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 TCF20Q9UGU0 1960 aaKnown RBP15.59■□□□□ 0.09
SMAD3-214ENST00000560402 LCHNA4D1U4 455 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 RFXAPO00287 272 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 AMHP03971 560 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 THPOP40225 353 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 LIFRP42702 1097 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 ERVK-21P61565 698 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 SEMA3FQ13275 785 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 CYFIP1Q7L576 1253 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 GPRASP2Q96D09 838 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 GPR20Q99678 358 aa15.59■□□□□ 0.09
SMAD3-214ENST00000560402 BDP1A6H8Y1 2624 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 MEIS2O14770 477 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 REC8O95072 547 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 SEC24BO95487 1268 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 MKRN4PQ13434 485 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-214ENST00000560402 HIC1Q14526 733 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 PIBF1Q8WXW3 757 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 APBB2Q92870 758 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 ZFP91Q96JP5 570 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-214ENST00000560402 SAMD11Q96NU1 681 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 MYL10Q9BUA6 226 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 LSG1Q9H089 658 aaKnown RBP15.58■□□□□ 0.08
SMAD3-214ENST00000560402 INSL6Q9Y581 213 aa15.58■□□□□ 0.08
SMAD3-214ENST00000560402 LINC01553A4QN01 128 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 SLC27A2O14975 620 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 TREHO43280 583 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 LPXNO60711 386 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 PLEKHA8P1O95397 391 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 BMP1P13497 986 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 USP17L6PQ6QN14 398 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 DBF4BQ8NFT6 615 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 GDPD5Q8WTR4 605 aa15.57■□□□□ 0.08
SMAD3-214ENST00000560402 SEPT8Q92599 483 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms