RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	NEDD1	Q8NHV4	660 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	CERK	Q8TCT0	537 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	RSAD2	Q8WXG1	361 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	APOL6	Q9BWW8	343 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	ZHX2	Q9Y6X8	837 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SFI1	A8K8P3	1242 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	LRRN2	O75325	713 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	TBC1D8	O95759	1140 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	RFX5	P48382	616 aa	Predicted RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	LRRC63	Q05C16	580 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PPP2R5D	Q14738	602 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PDXDC2P	Q6P474	469 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	ADGRF4	Q8IZF3	695 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PIGO	Q8TEQ8	1089 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	NDST4	Q9H3R1	872 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	RAVER2	Q9HCJ3	691 aa	Known RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	GCNT4	Q9P109	453 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SPATA31A5	Q5VU36	1347 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SPATA31A7	Q8IWB4	1347 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SOWAHD	A6NJG2	315 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	NKX1-1	Q15270	411 aa	Predicted RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SPOUT1	Q5T280	376 aa	Known RBP	10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	CASC4	Q6P4E1	433 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	TAOK1	Q7L7X3	1001 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	FAM133A	Q8N9E0	248 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	SLC10A4	Q96EP9	437 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	WRNIP1	Q96S55	665 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	NDUFAB1	O14561	156 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	AKR1B1	P15121	316 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	MNAT1	P51948	309 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PPFIA1	Q13136	1202 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	KRT31	Q15323	416 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PPP2R5E	Q16537	467 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	DENND2C	Q68D51	928 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	PPP1R18	Q6NYC8	613 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	STAG2	Q8N3U4	1231 aa		10.19	□□□□□ -0.78
NEO1-208	ENST00000560328	OAS2	P29728	719 aa	Known RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	HOXA7	P31268	230 aa	Predicted RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	HSPA1L	P34931	641 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	ZBED6	P86452	979 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	KRT71	Q3SY84	523 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	EXOC8	Q8IYI6	725 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	AP5M1	Q9H0R1	490 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	SUGT1	Q9Y2Z0	365 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	KIF28P	B7ZC32	967 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	CAPN9	O14815	690 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	ADCY8	P40145	1251 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	MESD	Q14696	234 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	ANKRD36BP1	Q96IX9	119 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	RMDN3	Q96TC7	470 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	VPS37B	Q9H9H4	285 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	TTLL3	Q9Y4R7	772 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	GUCY1A2	P33402	732 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	UNC13D	Q70J99	1090 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	ACRBP	Q8NEB7	543 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	CEP63	Q96MT8	703 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	MIS12	Q9H081	205 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	CDC23	Q9UJX2	597 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	USP32	Q8NFA0	1604 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	TLR3	O15455	904 aa	Known RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	GFPT2	O94808	682 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	KRT15	P19012	456 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	MTMR1	Q13613	665 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	QRICH1	Q2TAL8	776 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	DPH5	Q9H2P9	285 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	CTNNA1	P35221	906 aa	Known RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	VPS41	P49754	854 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	ARHGAP4	P98171	946 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	POTED	Q86YR6	584 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	GRK7	Q8WTQ7	553 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	NSMCE1	Q8WV22	266 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	RABEP2	Q9H5N1	569 aa		10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.18	□□□□□ -0.78
NEO1-208	ENST00000560328	MYO1F	O00160	1098 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	ABCD1	P33897	745 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	SRBD1	Q8N5C6	995 aa	Known RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	MB21D1	Q8N884	522 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	HINFP	Q9BQA5	517 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	PLCB1	Q9NQ66	1216 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	HOXC10	Q9NYD6	342 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	POLR1A	O95602	1720 aa	Predicted RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328		A6NNZ2	444 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	THAP12	O43422	761 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	TUBB8	Q3ZCM7	444 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	NAA35	Q5VZE5	725 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	PPP4R3CP	Q6ZMV5	832 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	ZBTB33	Q86T24	672 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	DAGLA	Q9Y4D2	1042 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	RNF8	O76064	485 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	EIF4A3	P38919	411 aa	Known RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	TFAM	Q00059	246 aa	Known RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	LGSN	Q5TDP6	509 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	BSPRY	Q5W0U4	402 aa		10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	INTS8	Q75QN2	995 aa	Known RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	ZNF526	Q8TF50	670 aa	Predicted RBP	10.17	□□□□□ -0.78
NEO1-208	ENST00000560328	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms