RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF200P98182 395 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 MTMR1Q13613 665 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 NEDD9Q14511 834 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 PTGISQ16647 500 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 SESTD1Q86VW0 696 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 C7orf31Q8N865 590 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 ZMYND12Q9H0C1 365 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 IL23AQ9NPF7 189 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
RABGGTA-216ENST00000560243 COL6A3P12111 3177 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 SREBF1P36956 1147 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 ANAPC15P60006 121 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 AKAP17AQ02040 695 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 RASGRP4Q8TDF6 673 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 WNT8BQ93098 351 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 AIFM3Q96NN9 605 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 MXRA8Q9BRK3 442 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 TPCN1Q9ULQ1 816 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
RABGGTA-216ENST00000560243 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 CHD9Q3L8U1 2897 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 H3BRB1 525 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 ARP10275 920 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 AK2P54819 239 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 ARHGAP4P98171 946 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 SCRN1Q12765 414 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 TEX2Q8IWB9 1127 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 DEFB123Q8N688 67 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 CRYGNQ8WXF5 182 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 UIMC1Q96RL1 719 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 KATNAL1Q9BW62 490 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 KCNH7Q9NS40 1196 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 CXXC1Q9P0U4 656 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 CDH23Q9H251 3354 aa13.31□□□□□ -0.28
RABGGTA-216ENST00000560243 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 MEIS1O00470 390 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 CPLX1O14810 134 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 SSRP1Q08945 709 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 CEP55Q53EZ4 464 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 OTOP2Q7RTS6 562 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 DEFB128Q7Z7B8 93 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 GIMAP8Q8ND71 665 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 CDHR1Q96JP9 859 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 GLT8D2Q9H1C3 349 aa13.3□□□□□ -0.28
RABGGTA-216ENST00000560243 IGLV3-22A0A075B6J6 115 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 EDIL3O43854 480 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 PFKFB2O60825 505 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 LARGE1O95461 756 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 FGBP02675 491 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 SMIM10L2AP0DMW4 78 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 SMIM10L2BP0DMW5 78 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 BFSP2Q13515 415 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 GPNMBQ14956 572 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 TRIM71Q2Q1W2 868 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 HERVK_113Q902F9 699 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 FAM161BQ96MY7 647 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 RNPEPQ9H4A4 650 aa13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 AGO4Q9HCK5 861 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-216ENST00000560243 GBF1Q92538 1859 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 MAFGO15525 162 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 DEXIO95424 95 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 CKBP12277 381 aa13.28□□□□□ -0.28
RABGGTA-216ENST00000560243 GNA11P29992 359 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms