RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TADA3O75528 432 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 LRG1P02750 347 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 LCP1P13796 627 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 TACR2P21452 398 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 PPP2CBP62714 309 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 PPP2CAP67775 309 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 EMC4Q5J8M3 183 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 PKN3Q6P5Z2 889 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 IGDCC4Q8TDY8 1250 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.65□□□□□ -1.5
LRRC28-218ENST00000560236 MRRFQ96E11 262 aaKnown RBP5.65□□□□□ -1.5
LRRC28-218ENST00000560236 SORCS2Q96PQ0 1159 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 CDK5RAP1Q96SZ6 601 aaKnown RBP5.65□□□□□ -1.5
LRRC28-218ENST00000560236 KLC2Q9H0B6 622 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
LRRC28-218ENST00000560236 B2RBV5 119 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 GPR42O15529 346 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 SUV39H1O43463 412 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 SUSD5O60279 629 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 ATF4P18848 351 aaPredicted RBP5.64□□□□□ -1.51
LRRC28-218ENST00000560236 GDF5P43026 501 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 EPHB4P54760 987 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 GFRA1P56159 465 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 CDSNQ15517 529 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 TNNI3KQ59H18 835 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 TRMT10BQ6PF06 316 aaKnown RBP5.64□□□□□ -1.51
LRRC28-218ENST00000560236 TMC5Q6UXY8 1006 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 TMEM145Q8NBT3 493 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 ZCCHC14Q8WYQ9 949 aaKnown RBP5.64□□□□□ -1.51
LRRC28-218ENST00000560236 DEF6Q9H4E7 631 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 CD248Q9HCU0 757 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 MYOTQ9UBF9 498 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 PRDM2Q13029 1718 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 FANCD2Q9BXW9 1451 aa5.64□□□□□ -1.51
LRRC28-218ENST00000560236 B4GALT4O60513 344 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 MAFKO60675 156 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 DDAH1O94760 285 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 DENND5AQ6IQ26 1287 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 KLHL36Q8N4N3 616 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 DNERQ8NFT8 737 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 SCAND2PQ9GZW5 306 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-218ENST00000560236 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 BARX1Q9HBU1 254 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-218ENST00000560236 ZDHHC9Q9Y397 364 aa5.63□□□□□ -1.51
LRRC28-218ENST00000560236 SSBP05455 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRRC28-218ENST00000560236 NFATC3Q12968 1075 aa5.62□□□□□ -1.51
LRRC28-218ENST00000560236 SLFN13Q68D06 897 aa5.62□□□□□ -1.51
LRRC28-218ENST00000560236 ZNF585AQ6P3V2 769 aa5.62□□□□□ -1.51
LRRC28-218ENST00000560236 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
LRRC28-218ENST00000560236 WASF3Q9UPY6 502 aa5.62□□□□□ -1.51
LRRC28-218ENST00000560236 KRIT1O00522 736 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 HMGA2P52926 109 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 FXNQ16595 210 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 CRIP3Q6Q6R5 217 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 VPS37DQ86XT2 251 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 TRIM48Q8IWZ4 208 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 PALM2Q8IXS6 379 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 Q8N1X5 172 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 C1orf159Q96HA4 380 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 IFT140Q96RY7 1462 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 PTPN18Q99952 460 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 HSPBP1Q9NZL4 362 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 RBPJLQ9UBG7 517 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 NPFFR2Q9Y5X5 522 aa5.61□□□□□ -1.51
LRRC28-218ENST00000560236 URB2Q14146 1524 aaKnown RBP5.6□□□□□ -1.51
LRRC28-218ENST00000560236 SELENOPP49908 381 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 SLC35F1Q5T1Q4 408 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 MRM1Q6IN84 353 aaKnown RBP5.6□□□□□ -1.51
LRRC28-218ENST00000560236 CYP4F22Q6NT55 531 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 USP51Q70EK9 711 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 VPS11Q9H270 941 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 KIAA1522Q9P206 1035 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-218ENST00000560236 ASH2LQ9UBL3 628 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 TCAF1Q9Y4C2 921 aa5.6□□□□□ -1.51
LRRC28-218ENST00000560236 EIF4G3O43432 1585 aaKnown RBP5.59□□□□□ -1.51
LRRC28-218ENST00000560236 PATE3B3GLJ2 98 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 AGRPO00253 132 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 CYR61O00622 381 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 FZD7O75084 574 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 AMHP03971 560 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 ACVRL1P37023 503 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 GRIA2P42262 883 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 VASNQ6EMK4 673 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 EEPD1Q7L9B9 569 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 NUDT10Q8NFP7 164 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 TTLL11Q8NHH1 800 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 PIP4K2CQ8TBX8 421 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 MICAL1Q8TDZ2 1067 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 KCTD13Q8WZ19 329 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 NUDT11Q96G61 164 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 ZNF747Q9BV97 191 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 MRIQ9BWK5 157 aa5.59□□□□□ -1.51
LRRC28-218ENST00000560236 JAM3Q9BX67 310 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms