RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 HLTFQ14527 1009 aaKnown RBP eCLIP20.96■□□□□ 0.951e-8■■■■■ 31.8
SEMA4B-215ENST00000560089 TRADDQ15628 312 aa20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 Q4G0T1 1027 aa20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 NLRP10Q86W26 655 aa20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 MLXIPQ9HAP2 919 aa20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 DMAP1Q9NPF5 467 aaPredicted RBP20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 NFS1Q9Y697 457 aa20.96■□□□□ 0.95
SEMA4B-215ENST00000560089 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 FLOT1O75955 427 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 PTPN12Q05209 780 aaKnown RBP20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 RASA3Q14644 834 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 TCP11X2Q5H9J9 407 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 AKNAD1Q5T1N1 836 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 PIGWQ7Z7B1 504 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 AMIGO3Q86WK7 504 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 ELAC2Q9BQ52 826 aaKnown RBP20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 MYH13Q9UKX3 1938 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 USO1O60763 962 aaKnown RBP20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 CASP1P29466 404 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 GBP1P32455 592 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 WASHC4Q2M389 1173 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 LONP2Q86WA8 852 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 MS4A14Q96JA4 679 aa20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 CNOT10Q9H9A5 744 aaKnown RBP20.95■□□□□ 0.94
SEMA4B-215ENST00000560089 NCK2O43639 380 aa20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 RFX5P48382 616 aaPredicted RBP20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 CFAP221Q4G0U5 840 aa20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 CCNL1Q9UK58 526 aaPredicted RBP20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 CAPN11Q9UMQ6 739 aa20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 MAPK8IP1Q9UQF2 711 aa20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 ZNF131P52739 623 aa20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 ZNF317Q96PQ6 595 aaPredicted RBP20.94■□□□□ 0.94
SEMA4B-215ENST00000560089 SH2B2O14492 632 aaPredicted RBP20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 IFT74Q96LB3 600 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 NLRP3Q96P20 1036 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 GGT7Q9UJ14 662 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 FBXO2Q9UK22 296 aaPredicted RBP20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 ZNF189O75820 626 aaPredicted RBP20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 DPYDQ12882 1025 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 SPA17Q15506 151 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 MEA1Q16626 185 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 RABL6Q3YEC7 729 aaPredicted RBP20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 BICDL1Q6ZP65 573 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 KRT12Q99456 494 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 DSCC1Q9BVC3 393 aa20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 ZMYND8Q9ULU4 1186 aaPredicted RBP20.93■□□□□ 0.94
SEMA4B-215ENST00000560089 BTAF1O14981 1849 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 GNAZP19086 355 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 INHBCP55103 352 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 UAP1Q16222 522 aaPredicted RBP20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 OR52E8Q6IFG1 317 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 LRRC45Q96CN5 670 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 MTRQ99707 1265 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 RAB17Q9H0T7 212 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 PENKP01210 267 aaPredicted RBP20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 PTPREP23469 700 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 RAD23BP54727 409 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 DEUP1Q05D60 604 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 MFSD4BQ5TF39 518 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 TSHZ1Q6ZSZ6 1077 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 CENPTQ96BT3 561 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 TRIM7Q9C029 511 aa20.92■□□□□ 0.94
SEMA4B-215ENST00000560089 GALNT17Q6IS24 598 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 CHADLQ6NUI6 762 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 LRRC34Q8IZ02 419 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 FBXL16Q8N461 479 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 PHC3Q8NDX5 983 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 UBLCP1Q8WVY7 318 aaPredicted RBP20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 SH2D4AQ9H788 454 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.91■□□□□ 0.942e-6■■■■■ 62.4
SEMA4B-215ENST00000560089 NKX1-2Q9UD57 310 aaPredicted RBP20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 TMCO1Q9UM00 188 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 MMEP08473 750 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 COPS2P61201 443 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 TFCP2Q12800 502 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 CMPK2Q5EBM0 449 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 FOXB2Q5VYV0 432 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 MB21D1Q8N884 522 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 IFT43Q96FT9 208 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 TSPAN18Q96SJ8 248 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 PUS3Q9BZE2 481 aaKnown RBP20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 ARHGEF3Q9NR81 526 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 SMAPO00193 183 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 WFS1O76024 890 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 CAMTA2O94983 1202 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 EIF4BP23588 611 aaKnown RBP20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 TRIM29Q14134 588 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 TSNAXIP1Q2TAA8 658 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 KRT71Q3SY84 523 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 SCOCQ9UIL1 159 aa20.91■□□□□ 0.94
SEMA4B-215ENST00000560089 ABCC12Q96J65 1359 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 MYH10P35580 1976 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 GNPATO15228 680 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 LRRC24Q50LG9 513 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 RINLQ6ZS11 566 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 USP49Q70CQ1 688 aa20.9■□□□□ 0.94
SEMA4B-215ENST00000560089 KRT27Q7Z3Y8 459 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms