RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MKRN4PQ13434 485 aaPredicted RBP23.68■■□□□ 1.38
PSEN1-225ENST00000560005 EMID1Q96A84 441 aaPredicted RBP23.68■■□□□ 1.38
PSEN1-225ENST00000560005 RMDN3Q96TC7 470 aa23.68■■□□□ 1.38
PSEN1-225ENST00000560005 UBA5Q9GZZ9 404 aa23.68■■□□□ 1.38
PSEN1-225ENST00000560005 PDRG1Q9NUG6 133 aa23.68■■□□□ 1.38
PSEN1-225ENST00000560005 EMSYQ7Z589 1322 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 HIC1Q14526 733 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 TCEAL5Q5H9L2 206 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 DHX37Q8IY37 1157 aaKnown RBP23.67■■□□□ 1.38
PSEN1-225ENST00000560005 PPTC7Q8NI37 304 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 PABPC5Q96DU9 382 aaKnown RBP23.67■■□□□ 1.38
PSEN1-225ENST00000560005 IWS1Q96ST2 819 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 UPF3BQ9BZI7 483 aaKnown RBP23.67■■□□□ 1.38
PSEN1-225ENST00000560005 MRVI1Q9Y6F6 885 aa23.67■■□□□ 1.38
PSEN1-225ENST00000560005 ABCB11O95342 1321 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 THPOP40225 353 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 GPM6BQ13491 265 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 LAMC2Q13753 1193 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 CDC37Q16543 378 aaPredicted RBP23.66■■□□□ 1.38
PSEN1-225ENST00000560005 GPATCH4Q5T3I0 446 aaKnown RBP23.66■■□□□ 1.38
PSEN1-225ENST00000560005 ZSCAN31Q96LW9 406 aaPredicted RBP23.66■■□□□ 1.38
PSEN1-225ENST00000560005 TTC14Q96N46 770 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 SAMD11Q96NU1 681 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 KCNH6Q9H252 994 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 FAM50BQ9Y247 325 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 ZNF318Q5VUA4 2279 aa23.66■■□□□ 1.38
PSEN1-225ENST00000560005 RSPH10B2B2RC85 870 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 H3BNC9 293 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 RSPH10BP0C881 870 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 EIF2AK2P19525 551 aaKnown RBP23.65■■□□□ 1.38
PSEN1-225ENST00000560005 HAND2P61296 217 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 ADCK5Q3MIX3 580 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 YME1L1Q96TA2 773 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 PRKAG3Q9UGI9 489 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 LAMA4Q16363 1823 aa23.65■■□□□ 1.38
PSEN1-225ENST00000560005 MYO7AQ13402 2215 aa23.64■■□□□ 1.38
PSEN1-225ENST00000560005 EIF3JO75822 258 aaKnown RBP23.64■■□□□ 1.37
PSEN1-225ENST00000560005 RPS6KB1P23443 525 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 TRDNQ13061 729 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 PLEKHG4Q58EX7 1191 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 ARHGEF16Q5VV41 709 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 ANKS1AQ92625 1134 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 MAF1Q9H063 256 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 NSUN3Q9H649 340 aaKnown RBP23.64■■□□□ 1.37
PSEN1-225ENST00000560005 CLDND1Q9NY35 253 aa23.64■■□□□ 1.37
PSEN1-225ENST00000560005 C19orf67A6NJJ6 358 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 E7EWF7 191 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 SORBS3O60504 671 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 COL19A1Q14993 1142 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 HFE2Q6ZVN8 426 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 DHX32Q7L7V1 743 aaKnown RBP23.63■■□□□ 1.37
PSEN1-225ENST00000560005 SERINC5Q86VE9 423 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 FBXO11Q86XK2 927 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 MCF2L2Q86YR7 1114 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 ADHFE1Q8IWW8 467 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 TMEM192Q8IY95 271 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 LIMCH1Q9UPQ0 1083 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 MYH7BA7E2Y1 1941 aa23.63■■□□□ 1.37
PSEN1-225ENST00000560005 UPP2O95045 317 aa23.62■■□□□ 1.37
PSEN1-225ENST00000560005 CD2BP2O95400 341 aaKnown RBP23.62■■□□□ 1.37
PSEN1-225ENST00000560005 HOXD8P13378 290 aaPredicted RBP23.62■■□□□ 1.37
PSEN1-225ENST00000560005 NCOA7Q8NI08 942 aa23.62■■□□□ 1.37
PSEN1-225ENST00000560005 TOP1MTQ969P6 601 aa23.62■■□□□ 1.37
PSEN1-225ENST00000560005 ZKSCAN3Q9BRR0 538 aa23.62■■□□□ 1.37
PSEN1-225ENST00000560005 NR3C2P08235 984 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 IRS1P35568 1242 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 MFSD6Q6ZSS7 791 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 RALYLQ86SE5 291 aaKnown RBP23.61■■□□□ 1.37
PSEN1-225ENST00000560005 SEPT8Q92599 483 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 RNF41Q9H4P4 317 aaPredicted RBP23.61■■□□□ 1.37
PSEN1-225ENST00000560005 CNNM2Q9H8M5 875 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 PXMP2Q9NR77 195 aa23.61■■□□□ 1.37
PSEN1-225ENST00000560005 SH2B1Q9NRF2 756 aaPredicted RBP23.61■■□□□ 1.37
PSEN1-225ENST00000560005 NLRC5Q86WI3 1866 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 PPFIA4O75335 1185 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 PCP11498 1178 aaKnown RBP23.6■■□□□ 1.37
PSEN1-225ENST00000560005 NT5C2P49902 561 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 QRICH1Q2TAL8 776 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 MYSM1Q5VVJ2 828 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 RPAINQ86UA6 219 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 ADGRF4Q8IZF3 695 aa23.6■■□□□ 1.37
PSEN1-225ENST00000560005 INTS4Q96HW7 963 aaKnown RBP23.6■■□□□ 1.37
PSEN1-225ENST00000560005 MRPL11Q9Y3B7 192 aaKnown RBP23.6■■□□□ 1.37
PSEN1-225ENST00000560005 LTBRP36941 435 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 AK2P54819 239 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 CLUL1Q15846 466 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 TBC1D10CQ8IV04 446 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 ATP6V0A1Q93050 837 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 TMX3Q96JJ7 454 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 MFSD14AQ96MC6 490 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 SPATA33Q96N06 139 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 OSBPL7Q9BZF2 842 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 CIZ1Q9ULV3 898 aaPredicted RBP23.59■■□□□ 1.37
PSEN1-225ENST00000560005 COL4A6Q14031 1691 aa23.59■■□□□ 1.37
PSEN1-225ENST00000560005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.58■■□□□ 1.37
PSEN1-225ENST00000560005 C17orf102A2RUQ5 167 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 CFBP00751 764 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 CTSHP09668 335 aa23.58■■□□□ 1.37
PSEN1-225ENST00000560005 MCM5P33992 734 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms