RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MSL3Q8N5Y2 521 aaKnown RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 TRIB2Q92519 343 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 SLC5A5Q92911 643 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 SCAND2PQ9GZW5 306 aaPredicted RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 AGO4Q9HCK5 861 aaKnown RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.63□□□□□ -0.71
HERC1-206ENST00000559996 SRRDQ9UH36 339 aa10.63□□□□□ -0.71
HERC1-206ENST00000559996 ELP1O95163 1332 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 FOXN1O15353 648 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 MAFGO15525 162 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 ADCY6O43306 1168 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 FIBPO43427 364 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 NEMFO60524 1076 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 HSPA8P11142 646 aaKnown RBP10.62□□□□□ -0.71
HERC1-206ENST00000559996 KCNA2P16389 499 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 PTGS1P23219 599 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 MCM4P33991 863 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 RGS2P41220 211 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 TRIM32Q13049 653 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 SHC4Q6S5L8 630 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 USP49Q70CQ1 688 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 OTOP1Q7RTM1 612 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 IGSF22Q8N9C0 903 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 SOCS4Q8WXH5 440 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 SPATA32Q96LK8 384 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 FAM20AQ96MK3 541 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 NAP1L4Q99733 375 aaKnown RBP10.62□□□□□ -0.71
HERC1-206ENST00000559996 APBA2Q99767 749 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 MMTAG2Q9BU76 263 aaKnown RBP10.62□□□□□ -0.71
HERC1-206ENST00000559996 VAV3Q9UKW4 847 aa10.62□□□□□ -0.71
HERC1-206ENST00000559996 FAM237AA0A1B0GTK4 181 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.61□□□□□ -0.71
HERC1-206ENST00000559996 EML1O00423 815 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 LAD1O00515 517 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 PRPF40AO75400 957 aaKnown RBP10.61□□□□□ -0.71
HERC1-206ENST00000559996 BMP15O95972 392 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 GNRH1P01148 92 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 OR52Z1P0C646 297 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
HERC1-206ENST00000559996 CYP2C19P33261 490 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 ZNF76P36508 570 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 TXKP42681 527 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 PDE4DQ08499 809 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 KIF22Q14807 665 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 STK38Q15208 465 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 CALCRLQ16602 461 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 LY6KQ17RY6 165 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 SEPT14Q6ZU15 432 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 FBXO16Q8IX29 292 aaPredicted RBP10.61□□□□□ -0.71
HERC1-206ENST00000559996 CSRNP2Q9H175 543 aa10.61□□□□□ -0.71
HERC1-206ENST00000559996 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
HERC1-206ENST00000559996 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 IPO5O00410 1097 aaKnown RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 ATG7O95352 703 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 CCNE2O96020 404 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 TGFB3P10600 412 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 CDC25AP30304 524 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 TECP42680 631 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 PPP2R5CQ13362 524 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 MTMR1Q13613 665 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 ACVR2BQ13705 512 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 PDIA5Q14554 519 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 SPECC1Q5M775 1068 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 ENGASEQ8NFI3 743 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 KCNG4Q8TDN1 519 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 COPS5Q92905 334 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 EPSTI1Q96J88 318 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 RIT2Q99578 217 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 SENP7Q9BQF6 1050 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 ZNF577Q9BSK1 485 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 ABHD16BQ9H3Z7 469 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 GOLPH3LQ9H4A5 285 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 TTC12Q9H892 705 aaPredicted RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 VTA1Q9NP79 307 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 SLC5A4Q9NY91 659 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 CEP131Q9UPN4 1083 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 GNEQ9Y223 722 aaKnown RBP10.6□□□□□ -0.71
HERC1-206ENST00000559996 HPSEQ9Y251 543 aa10.6□□□□□ -0.71
HERC1-206ENST00000559996 NFASCO94856 1347 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 DOCK5Q9H7D0 1870 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 A0A087X0B3 334 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 A0A1W2PQ27 194 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 A0A1W2PQ64 194 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 A0A1W2PQD8 194 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 VWA3AA6NCI4 1184 aa10.59□□□□□ -0.71
HERC1-206ENST00000559996 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms