RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■□□ 16.3
SMAD3-212ENST00000559937 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 FAM184BQ9ULE4 1060 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 REXO2Q9Y3B8 237 aaKnown RBP8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PCDHA2Q9Y5H9 948 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PCDHAC2Q9Y5I4 1007 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 COL4A3BPQ9Y5P4 624 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
SMAD3-212ENST00000559937 MYH10P35580 1976 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PARP14Q460N5 1801 aa8.96□□□□□ -0.97
SMAD3-212ENST00000559937 SSU72P8A0A1W2PR75 194 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 CCDC151A5D8V7 595 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 YDJCA8MPS7 323 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 GDF11O95390 407 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 VIL1P09327 827 aaKnown RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 YY1P25490 414 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 POLD1P28340 1107 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 STAT2P52630 851 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 VAV2P52735 878 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 SLC12A3P55017 1021 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 CBX1P83916 185 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 IKQ13123 557 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 ECM1Q16610 540 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 UTP14CQ5TAP6 766 aaKnown RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 PAPD7Q5XG87 772 aaKnown RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 KIAA1328Q86T90 577 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 FAM83AQ86UY5 434 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 MSL3Q8N5Y2 521 aaKnown RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 SYT2Q8N9I0 419 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 NEK11Q8NG66 645 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 CHURC1Q8WUH1 139 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 SYN2Q92777 582 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 JAKMIP2Q96AA8 810 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 LENG9Q96B70 501 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 PRMT6Q96LA8 375 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 CSRNP1Q96S65 589 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 IRX2Q9BZI1 471 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 DEFB129Q9H1M3 183 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 NHEJ1Q9H9Q4 299 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 AGPAT5Q9NUQ2 364 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF446Q9NWS9 450 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF70Q9UC06 446 aaPredicted RBP8.96□□□□□ -0.98
SMAD3-212ENST00000559937 PRR12Q9ULL5 1215 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.98
SMAD3-212ENST00000559937 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CTAGE15A4D2H0 777 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 POTECB2RU33 542 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 E9PMD0 336 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 RAD21O60216 631 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 USO1O60763 962 aaKnown RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 MED24O75448 989 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 EYA4O95677 639 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CTAGE8P0CG41 777 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 PNMA6AP0CW24 399 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 SLURP2P0DP57 97 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 GAP43P17677 238 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CKAP4Q07065 602 aaKnown RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 DLGAP5Q15398 846 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 SPA17Q15506 151 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 BMT2Q1RMZ1 405 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 SHROOM1Q2M3G4 852 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 SPDYE2Q495Y8 402 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CCDC40Q4G0X9 1142 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CCDC122Q5T0U0 273 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 PDXDC1Q6P996 788 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CTAGE6Q86UF2 777 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 TRIM59Q8IWR1 403 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CTAGE4Q8IX94 777 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 AGBL3Q8NEM8 1001 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 HNRNPLLQ8WVV9 542 aaKnown RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 HPS3Q969F9 1004 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 RANBP17Q9H2T7 1088 aaKnown RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 KCTD10Q9H3F6 313 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 TUFT1Q9NNX1 390 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 GINM1Q9NU53 330 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CEP72Q9P209 647 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 RAB21Q9UL25 225 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 MYO6Q9UM54 1294 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 DNM3Q9UQ16 869 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 TRAF3IP3Q9Y228 551 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 MRPL11Q9Y3B7 192 aaKnown RBP8.95□□□□□ -0.98
SMAD3-212ENST00000559937 DOCK1Q14185 1865 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 CNTNAP1P78357 1384 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
SMAD3-212ENST00000559937 A0A0U1RQJ8 604 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 A0A1W2PRG0 241 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 TRAF5O00463 557 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 PDXKO00764 312 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 OPLAHO14841 1288 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 CETN3O15182 167 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 MSH4O15457 936 aa8.94□□□□□ -0.98
SMAD3-212ENST00000559937 PJA2O43164 708 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms