RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TMEM240Q5SV17 173 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
LRRC28-214ENST00000559433 ZNF365Q70YC5 407 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 C16orf59Q7L2K0 433 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 CCDC155Q8N6L0 562 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 GIMAP8Q8ND71 665 aaPredicted RBP14.41□□□□□ -0.1
LRRC28-214ENST00000559433 PHKBQ93100 1093 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 SCLYQ96I15 445 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 CDHR1Q96JP9 859 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 PGBD1Q96JS3 809 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 SLC26A6Q9BXS9 759 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 NCOA5Q9HCD5 579 aaKnown RBP14.41□□□□□ -0.1
LRRC28-214ENST00000559433 PDRG1Q9NUG6 133 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 TMEM260Q9NX78 707 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 MTMR10Q9NXD2 777 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 GBF1Q92538 1859 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 HAS3O00219 553 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 PRPF3O43395 683 aaKnown RBP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 PPFIA3O75145 1194 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 FOSP01100 380 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 LGALS2P05162 132 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 SP4Q02446 784 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 AP3B2Q13367 1082 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 MTMR1Q13613 665 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 CCDC12Q8WUD4 166 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 GPR20Q99678 358 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 LARP6Q9BRS8 491 aaKnown RBP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.1
LRRC28-214ENST00000559433 PKD2L1Q9P0L9 805 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 UBIAD1Q9Y5Z9 338 aa14.4□□□□□ -0.1
LRRC28-214ENST00000559433 KAT6AQ92794 2004 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 KCNA2P16389 499 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 IFNAR1P17181 557 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 NTRK3Q16288 839 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 PKN1Q16512 942 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 OTOP2Q7RTS6 562 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 SEMA6BQ9H3T3 888 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 C6orf50Q9HD87 102 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
LRRC28-214ENST00000559433 ESYT2A0FGR8 921 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 H3BRB1 525 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 CPLX1O14810 134 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 EIF5BO60841 1220 aaKnown RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ATP9AO75110 1047 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 PFKMP08237 780 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ACTN1P12814 892 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 RFC2P35250 354 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 CLK2P49760 499 aaKnown RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ANAPC15P60006 121 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 STK3Q13188 491 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 UTP14CQ5TAP6 766 aaKnown RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 JAKMIP3Q5VZ66 844 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 DEFB128Q7Z7B8 93 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 TRIM22Q8IYM9 498 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 CAGE1Q8TC20 777 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ZNF274Q96GC6 653 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 MXRA8Q9BRK3 442 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 TUT1Q9H6E5 874 aaKnown RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 MSRAQ9UJ68 235 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 ZNF215Q9UL58 517 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-214ENST00000559433 STXBP5LQ9Y2K9 1186 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
LRRC28-214ENST00000559433 MAFGO15525 162 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 GNA11P29992 359 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 SREBF1P36956 1147 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 RASIP1Q5U651 963 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
LRRC28-214ENST00000559433 CCDC148Q8NFR7 591 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 AFAP1L1Q8TED9 768 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
LRRC28-214ENST00000559433 VPS54Q9P1Q0 977 aa14.37□□□□□ -0.11
LRRC28-214ENST00000559433 C17orf102A2RUQ5 167 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 IQCF3P0C7M6 154 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 SMIM10L2AP0DMW4 78 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 SMIM10L2BP0DMW5 78 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 TCF7P36402 384 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-214ENST00000559433 ZNF76P36508 570 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 ARHGAP4P98171 946 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 ZNF200P98182 395 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-214ENST00000559433 SSRP1Q08945 709 aaKnown RBP14.36□□□□□ -0.11
LRRC28-214ENST00000559433 PTK7Q13308 1070 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 MCTP2Q6DN12 878 aa14.36□□□□□ -0.11
LRRC28-214ENST00000559433 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms