RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 GNAT1P11488 350 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 SEMA3FQ13275 785 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
TPM1-218ENST00000559281 DHX38Q92620 1227 aaKnown RBP20.37■□□□□ 0.85
TPM1-218ENST00000559281 GPR20Q99678 358 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 GLT8D2Q9H1C3 349 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 ZNF215Q9UL58 517 aaPredicted RBP20.37■□□□□ 0.85
TPM1-218ENST00000559281 NAP1L2Q9ULW6 460 aaPredicted RBP20.37■□□□□ 0.85
TPM1-218ENST00000559281 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 FOSP01100 380 aaPredicted RBP20.36■□□□□ 0.85
TPM1-218ENST00000559281 KCNJ6P48051 423 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 RABGGTBP53611 331 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 NAPAP54920 295 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 UBE2SQ16763 222 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 PPP1R18Q6NYC8 613 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 KCNB2Q92953 911 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 ATP6V0A1Q93050 837 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 PRDM12Q9H4Q4 367 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 BCAS3Q9H6U6 928 aa20.36■□□□□ 0.85
TPM1-218ENST00000559281 YBX2Q9Y2T7 364 aaKnown RBP20.36■□□□□ 0.85
TPM1-218ENST00000559281 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 HSPA4P34932 840 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 ZNF200P98182 395 aaPredicted RBP20.35■□□□□ 0.85
TPM1-218ENST00000559281 MTMR1Q13613 665 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 PPP2R2DQ66LE6 453 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 CNKSR3Q6P9H4 555 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 SERINC5Q86VE9 423 aa20.35■□□□□ 0.85
TPM1-218ENST00000559281 JAKMIP1Q96N16 626 aaKnown RBP20.35■□□□□ 0.85
TPM1-218ENST00000559281 CNTNAP5Q8WYK1 1306 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 EFCAB14O75071 495 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 CXCL10P02778 98 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 SMIM10L2AP0DMW4 78 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 SMIM10L2BP0DMW5 78 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 PSMA5P28066 241 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 SP4Q02446 784 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 UTP14CQ5TAP6 766 aaKnown RBP20.34■□□□□ 0.85
TPM1-218ENST00000559281 SEPT1Q8WYJ6 367 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 RNPEPQ9H4A4 650 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 RIC8AQ9NPQ8 531 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 JADE2Q9NQC1 790 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 UBIAD1Q9Y5Z9 338 aa20.34■□□□□ 0.85
TPM1-218ENST00000559281 EMSYQ7Z589 1322 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 ABHD14A-ACY1A0A1B0GW23 586 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 ITGB5P18084 799 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 THPOP40225 353 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
TPM1-218ENST00000559281 ADCY7P51828 1080 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 FUT2Q10981 343 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 TRIM71Q2Q1W2 868 aaKnown RBP20.33■□□□□ 0.85
TPM1-218ENST00000559281 ZNF618Q5T7W0 954 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 Q6ZUG5 572 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 HERC6Q8IVU3 1022 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 SNX14Q9Y5W7 946 aa20.33■□□□□ 0.85
TPM1-218ENST00000559281 SMCO2A6NFE2 343 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 RSPH10B2B2RC85 870 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 NBNO60934 754 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 ATP9AO75110 1047 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 RSPH10BP0C881 870 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 MYOGP15173 224 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 KCNA2P16389 499 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 HOXC8P31273 242 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 IKBKEQ14164 716 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 GPNMBQ14956 572 aa20.32■□□□□ 0.84
TPM1-218ENST00000559281 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
TPM1-218ENST00000559281 CAND2O75155 1236 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 IGFBP4P22692 258 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 CDC27P30260 824 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 ADD1P35611 737 aaKnown RBP20.31■□□□□ 0.84
TPM1-218ENST00000559281 TCF7P36402 384 aaPredicted RBP20.31■□□□□ 0.84
TPM1-218ENST00000559281 HIC1Q14526 733 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 FBXL16Q8N461 479 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 BRF1Q92994 677 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 ZBED2Q9BTP6 218 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 FAM217BQ9NTX9 383 aaPredicted RBP20.31■□□□□ 0.84
TPM1-218ENST00000559281 SETD4Q9NVD3 440 aa20.31■□□□□ 0.84
TPM1-218ENST00000559281 NRCAMQ92823 1304 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 STXBP3O00186 592 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 TREHO43280 583 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 TLL1O43897 1013 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 LGR5O75473 907 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 CA3P07451 260 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 CPA1P15085 419 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 WDR5P61964 334 aaKnown RBP20.3■□□□□ 0.84
TPM1-218ENST00000559281 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 AP3B2Q13367 1082 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 TRIM50Q86XT4 487 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
TPM1-218ENST00000559281 WNT8BQ93098 351 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 MXRA8Q9BRK3 442 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 SMARCAD1Q9H4L7 1026 aa20.3■□□□□ 0.84
TPM1-218ENST00000559281 RPS6KB1P23443 525 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 AKAP17AQ02040 695 aaKnown RBP20.29■□□□□ 0.84
TPM1-218ENST00000559281 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
TPM1-218ENST00000559281 MCTP2Q6DN12 878 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 TYW1BQ6NUM6 668 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 TRAF7Q6Q0C0 670 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms