RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 A0A1B0GUL7 405 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
SPG11-213ENST00000558988 ASPAP45381 313 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 OS9Q13438 667 aaPredicted RBP9.03□□□□□ -0.96
SPG11-213ENST00000558988 PICALMQ13492 652 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 RASGRF1Q13972 1273 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 DCAF15Q66K64 600 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
SPG11-213ENST00000558988 HHIPL2Q6UWX4 724 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
SPG11-213ENST00000558988 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 BRI3BPQ8WY22 251 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 ARHGAP45Q92619 1136 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 HRASLS5Q96KN8 279 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 PTPN18Q99952 460 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 NRSN2Q9GZP1 204 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 SUGT1Q9Y2Z0 365 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
SPG11-213ENST00000558988 PNMA6EA0A0J9YXQ4 647 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 GNAI2P04899 355 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 CES1P23141 567 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 GTF2A2P52657 109 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 G3BP1Q13283 466 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPG11-213ENST00000558988 PKN2Q16513 984 aaKnown RBP9.02□□□□□ -0.97
SPG11-213ENST00000558988 IFI16Q16666 785 aaKnown RBP9.02□□□□□ -0.97
SPG11-213ENST00000558988 PI16Q6UXB8 463 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 OTOP1Q7RTM1 612 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 FAM43AQ8N2R8 423 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 HOOK2Q96ED9 719 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
SPG11-213ENST00000558988 MYH2Q9UKX2 1941 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 FAM87AP0C7U9 286 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 BTDP43251 543 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 RGS19P49795 217 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 RGS3P49796 1198 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
SPG11-213ENST00000558988 PDE12Q6L8Q7 609 aaKnown RBP9.01□□□□□ -0.97
SPG11-213ENST00000558988 MPZL3Q6UWV2 235 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 ERO1BQ86YB8 467 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 ZFPM1Q8IX07 1006 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 ZGPATQ8N5A5 531 aaKnown RBP9.01□□□□□ -0.97
SPG11-213ENST00000558988 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.01□□□□□ -0.97
SPG11-213ENST00000558988 FAM151AQ8WW52 585 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 RAI14Q9P0K7 980 aa9.01□□□□□ -0.97
SPG11-213ENST00000558988 BTBD19C9JJ37 291 aa9□□□□□ -0.97
SPG11-213ENST00000558988 WDHD1O75717 1129 aaPredicted RBP9□□□□□ -0.97
SPG11-213ENST00000558988 CTSBP07858 339 aa9□□□□□ -0.97
SPG11-213ENST00000558988 CETPP11597 493 aa9□□□□□ -0.97
SPG11-213ENST00000558988 SP3Q02447 781 aa9□□□□□ -0.97
SPG11-213ENST00000558988 SNAPC2Q13487 334 aa9□□□□□ -0.97
SPG11-213ENST00000558988 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
SPG11-213ENST00000558988 FKBP1CQ5VVH2 108 aa9□□□□□ -0.97
SPG11-213ENST00000558988 SPTY2D1Q68D10 685 aaPredicted RBP9□□□□□ -0.97
SPG11-213ENST00000558988 ZNF438Q7Z4V0 828 aa9□□□□□ -0.97
SPG11-213ENST00000558988 MRIQ9BWK5 157 aa9□□□□□ -0.97
SPG11-213ENST00000558988 GSX1Q9H4S2 264 aaPredicted RBP9□□□□□ -0.97
SPG11-213ENST00000558988 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
SPG11-213ENST00000558988 CTNND2Q9UQB3 1225 aa9□□□□□ -0.97
SPG11-213ENST00000558988 RPAP1Q9BWH6 1393 aaPredicted RBP8.99□□□□□ -0.97
SPG11-213ENST00000558988 SURF6O75683 361 aaKnown RBP8.99□□□□□ -0.97
SPG11-213ENST00000558988 RLBP1P12271 317 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 MECOMQ03112 1051 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 MTX1Q13505 466 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 KCNA10Q16322 511 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 TTC39AQ5SRH9 613 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 HOMEZQ8IX15 550 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 SPATA5Q8NB90 893 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 OSMRQ99650 979 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 ARHGAP39Q9C0H5 1083 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 HMG20BQ9P0W2 317 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 LRP2BPQ9P2M1 347 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 MROH7-TTC4A0A0A0MT08 1334 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 SALL1Q9NSC2 1324 aa8.99□□□□□ -0.97
SPG11-213ENST00000558988 GLI1P08151 1106 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 CAP1Q01518 475 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 CDK5R2Q13319 367 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 PPIL2Q13356 520 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 KIF22Q14807 665 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 GADL1Q6ZQY3 521 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 CCDC84Q86UT8 332 aaPredicted RBP8.98□□□□□ -0.97
SPG11-213ENST00000558988 DDX4Q9NQI0 724 aaKnown RBP8.98□□□□□ -0.97
SPG11-213ENST00000558988 PICK1Q9NRD5 415 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.98□□□□□ -0.97
SPG11-213ENST00000558988 CPA4Q9UI42 421 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 PLAGL2Q9UPG8 496 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 PTPN22Q9Y2R2 807 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 ZSWIM8A7E2V4 1837 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 DOCK2Q92608 1830 aa8.98□□□□□ -0.97
SPG11-213ENST00000558988 LAMB1P07942 1786 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 DDTLA6NHG4 134 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms