RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TTI2Q6NXR4 508 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 CPLX4Q7Z7G2 160 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 OSBPL9Q96SU4 736 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP4E1-202ENST00000558439 SWAP70Q9UH65 585 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 RRP15Q9Y3B9 282 aaKnown RBP16.96■□□□□ 0.31
AP4E1-202ENST00000558439 MRC1P22897 1456 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.31
AP4E1-202ENST00000558439 SPOPO43791 374 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 FUT2Q10981 343 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 E2F4Q16254 413 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 TMEM139Q8IV31 216 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 MS4A14Q96JA4 679 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 C7orf25Q9BPX7 421 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 MKRN1Q9UHC7 482 aaKnown RBP16.96■□□□□ 0.31
AP4E1-202ENST00000558439 H0YIN7 160 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 ODR4Q5SWX8 454 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 TBC1D16Q8TBP0 767 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 CSRNP1Q96S65 589 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 KBTBD4Q9NVX7 518 aa16.96■□□□□ 0.31
AP4E1-202ENST00000558439 SERPING1P05155 500 aa16.96■□□□□ 0.3
AP4E1-202ENST00000558439 EEF2P13639 858 aaKnown RBP16.96■□□□□ 0.3
AP4E1-202ENST00000558439 KCNH2Q12809 1159 aa16.96■□□□□ 0.3
AP4E1-202ENST00000558439 PSMD2Q13200 908 aa16.96■□□□□ 0.3
AP4E1-202ENST00000558439 SFR1Q86XK3 245 aa16.96■□□□□ 0.3
AP4E1-202ENST00000558439 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 AFPP02771 609 aaKnown RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 RSRC2Q7L4I2 434 aaKnown RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 FAM184BQ9ULE4 1060 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 CTNNA1P35221 906 aaKnown RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 LIG3P49916 1009 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 KRT71Q3SY84 523 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 LRCH2Q5VUJ6 765 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 C16orf86Q6ZW13 317 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 ARFGAP2Q8N6H7 521 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 MED15Q96RN5 788 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 KCND1Q9NSA2 647 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 AMFRQ9UKV5 643 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 UTP11Q9Y3A2 253 aaKnown RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 BEND6Q5SZJ8 279 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-202ENST00000558439 NSMFQ6X4W1 530 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
AP4E1-202ENST00000558439 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
AP4E1-202ENST00000558439 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 H3BQF6 201 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
AP4E1-202ENST00000558439 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 GH2P01242 217 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 MYZAPP0CAP1 466 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 KRT5P13647 590 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 EPHB4P54760 987 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 SLC10A5Q5PT55 438 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
AP4E1-202ENST00000558439 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
AP4E1-202ENST00000558439 CCDC127Q96BQ5 260 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 PCIF1Q9H4Z3 704 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 ANKZF1Q9H8Y5 726 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 STIM2Q9P246 746 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 E7EVH7 732 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 COG1Q8WTW3 980 aa16.94■□□□□ 0.3
AP4E1-202ENST00000558439 ANO9A1A5B4 782 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 SORBS3O60504 671 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 APBA3O96018 575 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 LRRC45Q96CN5 670 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 RASAL2Q9UJF2 1139 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 BMP3P12645 472 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 FAM186BQ8IYM0 893 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 MTRQ99707 1265 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 TDRD3Q9H7E2 651 aaKnown RBP16.93■□□□□ 0.3
AP4E1-202ENST00000558439 INPP5BP32019 993 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 HERVK_113P62684 666 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 SNX12Q9UMY4 172 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 BCS1LQ9Y276 419 aa16.93■□□□□ 0.3
AP4E1-202ENST00000558439 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
AP4E1-202ENST00000558439 ACTN1P12814 892 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 ZNF543Q08ER8 600 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 GRB10Q13322 594 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 PPP1R7Q15435 360 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 CCDC50Q8IVM0 306 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 SEMA6BQ9H3T3 888 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 METTL14Q9HCE5 456 aaKnown RBP16.92■□□□□ 0.3
AP4E1-202ENST00000558439 CRKP46108 304 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 SEPT7Q16181 437 aaKnown RBP16.92■□□□□ 0.3
AP4E1-202ENST00000558439 GOLPH3Q9H4A6 298 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 JMJD4Q9H9V9 463 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 ATP6V0A2Q9Y487 856 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 POLR2MP0CAP2 368 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms