RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
TRPM1-206ENST00000558212 NCOR1O75376 2440 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 SYNGAP1Q96PV0 1343 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 CXCL11O14625 94 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 TNPO2O14787 897 aaKnown RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 SYN1P17600 705 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 NCLP19338 710 aaKnown RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 ATP2B1P20020 1258 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 AMPD1P23109 780 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 RBL2Q08999 1139 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 APOBRQ0VD83 1088 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 GCKRQ14397 625 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 POU4F3Q15319 338 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.1
TRPM1-206ENST00000558212 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 RUNDC1Q96C34 613 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 IFT57Q9NWB7 429 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 STRIP2Q9ULQ0 834 aa8.15□□□□□ -1.1
TRPM1-206ENST00000558212 DDX60LQ5H9U9 1706 aaKnown RBP8.15□□□□□ -1.11
TRPM1-206ENST00000558212 LOC100289279A0A1B0GTE1 492 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 ELL2O00472 640 aaPredicted RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 HMGCRP04035 888 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CYP2C8P10632 490 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 MAOBP27338 520 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CACNB3P54284 484 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CASP7P55210 303 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 GNAI1P63096 354 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 RPL6Q02878 288 aaKnown RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 NOL9Q5SY16 702 aaKnown RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CCDC146Q8IYE0 955 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 TEKT1Q969V4 418 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 COA7Q96BR5 231 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CCDC86Q9H6F5 360 aaKnown RBP8.14□□□□□ -1.11
TRPM1-206ENST00000558212 C11orf49Q9H6J7 331 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 MYH16Q9H6N6 1097 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 CBX8Q9HC52 389 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 ZNF112Q9UJU3 913 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 EFR3BQ9Y2G0 817 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 SLC45A1Q9Y2W3 748 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 PCDHGC5Q9Y5F6 944 aa8.14□□□□□ -1.11
TRPM1-206ENST00000558212 DOCK3Q8IZD9 2030 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 ZNF862O60290 1169 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 HIBADHP31937 336 aaKnown RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 NASPP49321 788 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 CALD1Q05682 793 aaKnown RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 FASTKD5Q7L8L6 764 aaKnown RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 FMR1NBQ8N0W7 255 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 REXO1Q8N1G1 1221 aaKnown RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 MAFAQ8NHW3 353 aaPredicted RBP8.13□□□□□ -1.11
TRPM1-206ENST00000558212 GPBAR1Q8TDU6 330 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 TBC1D22AQ8WUA7 517 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 NKD1Q969G9 470 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 ZDHHC15Q96MV8 337 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 CORO1BQ9BR76 489 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 MRIQ9BWK5 157 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 LNPKQ9C0E8 428 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
TRPM1-206ENST00000558212 MAST3O60307 1309 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 BDP1A6H8Y1 2624 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 ANKRD62A6NC57 917 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 GFRA2O00451 464 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 DLGAP3O95886 979 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 CD68P34810 354 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 GTF2F1P35269 517 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 ZEB1P37275 1124 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 GYG1P46976 350 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 SNRPNP63162 240 aaKnown RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 MIGA2Q7L4E1 593 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 NOP9Q86U38 636 aaKnown RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 C8orf58Q8NAV2 365 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 SMCR8Q8TEV9 937 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 FAM84BQ96KN1 310 aaPredicted RBP8.12□□□□□ -1.11
TRPM1-206ENST00000558212 STK31Q9BXU1 1019 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 KCNK4Q9NYG8 393 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 OGDHLQ9ULD0 1010 aa8.12□□□□□ -1.11
TRPM1-206ENST00000558212 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 PFASO15067 1338 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 CDH23Q9H251 3354 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 PLIN1O60240 522 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 PLA2G5P39877 138 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 FAM110CQ1W6H9 321 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 APOBEC3HQ6NTF7 200 aaKnown RBP8.11□□□□□ -1.11
TRPM1-206ENST00000558212 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
TRPM1-206ENST00000558212 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms