RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 RAD50Q92878 1312 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TTLL8A6PVC2 850 aa8.8□□□□□ -1
SPG11-205ENST00000558080 DCDC2CA8MYV0 355 aa8.8□□□□□ -1
SPG11-205ENST00000558080 CTAGE5O15320 804 aa8.8□□□□□ -1
SPG11-205ENST00000558080 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
SPG11-205ENST00000558080 CLTBP09497 229 aa8.8□□□□□ -1
SPG11-205ENST00000558080 PARP1P09874 1014 aaKnown RBP8.8□□□□□ -1
SPG11-205ENST00000558080 ITGB8P26012 769 aa8.8□□□□□ -1
SPG11-205ENST00000558080 CST5P28325 142 aaPredicted RBP8.8□□□□□ -1
SPG11-205ENST00000558080 GSK3AP49840 483 aa8.8□□□□□ -1
SPG11-205ENST00000558080 ALDH5A1P51649 535 aaPredicted RBP8.8□□□□□ -1
SPG11-205ENST00000558080 PDE4DQ08499 809 aa8.8□□□□□ -1
SPG11-205ENST00000558080 SHHQ15465 462 aa8.8□□□□□ -1
SPG11-205ENST00000558080 CDC37Q16543 378 aaPredicted RBP8.8□□□□□ -1
SPG11-205ENST00000558080 LRIT3Q3SXY7 679 aa8.8□□□□□ -1
SPG11-205ENST00000558080 IFIT1BQ5T764 474 aaKnown RBP8.8□□□□□ -1
SPG11-205ENST00000558080 IQSEC1Q6DN90 963 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TAPT1Q6NXT6 567 aa8.8□□□□□ -1
SPG11-205ENST00000558080 KIAA1211Q6ZU35 1233 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TLK2Q86UE8 772 aa8.8□□□□□ -1
SPG11-205ENST00000558080 ADGRF4Q8IZF3 695 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TBC1D5Q92609 795 aa8.8□□□□□ -1
SPG11-205ENST00000558080 GLT1D1Q96MS3 346 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
SPG11-205ENST00000558080 ADD3Q9UEY8 706 aaKnown RBP8.8□□□□□ -1
SPG11-205ENST00000558080 LAMA3Q16787 3333 aa8.8□□□□□ -1
SPG11-205ENST00000558080 TET1Q8NFU7 2136 aa8.8□□□□□ -1
SPG11-205ENST00000558080 WDR19Q8NEZ3 1342 aa8.8□□□□□ -1
SPG11-205ENST00000558080 SGSM2O43147 1006 aa8.79□□□□□ -1
SPG11-205ENST00000558080 CYP21A2P08686 494 aa8.79□□□□□ -1
SPG11-205ENST00000558080 RAG1P15918 1043 aa8.79□□□□□ -1
SPG11-205ENST00000558080 NT5C2P49902 561 aa8.79□□□□□ -1
SPG11-205ENST00000558080 RPS6P62753 249 aaKnown RBP8.79□□□□□ -1
SPG11-205ENST00000558080 KRT76Q01546 638 aa8.79□□□□□ -1
SPG11-205ENST00000558080 FAAP100Q0VG06 881 aa8.79□□□□□ -1
SPG11-205ENST00000558080 TRDNQ13061 729 aa8.79□□□□□ -1
SPG11-205ENST00000558080 SEC23AQ15436 765 aa8.79□□□□□ -1
SPG11-205ENST00000558080 ASPRV1Q53RT3 343 aa8.79□□□□□ -1
SPG11-205ENST00000558080 C9orf50Q5SZB4 431 aa8.79□□□□□ -1
SPG11-205ENST00000558080 CXCL17Q6UXB2 119 aa8.79□□□□□ -1
SPG11-205ENST00000558080 Q6ZVU0 165 aa8.79□□□□□ -1
SPG11-205ENST00000558080 Q7L0L9 218 aa8.79□□□□□ -1
SPG11-205ENST00000558080 CHST3Q7LGC8 479 aa8.79□□□□□ -1
SPG11-205ENST00000558080 SKAP1Q86WV1 359 aa8.79□□□□□ -1
SPG11-205ENST00000558080 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
SPG11-205ENST00000558080 MORC4Q8TE76 937 aa8.79□□□□□ -1
SPG11-205ENST00000558080 VTA1Q9NP79 307 aa8.79□□□□□ -1
SPG11-205ENST00000558080 PNMA2Q9UL42 364 aa8.79□□□□□ -1
SPG11-205ENST00000558080 GNEQ9Y223 722 aaKnown RBP8.79□□□□□ -1
SPG11-205ENST00000558080 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
SPG11-205ENST00000558080 CUL9Q8IWT3 2517 aa8.79□□□□□ -1
SPG11-205ENST00000558080 ELP1O95163 1332 aa8.79□□□□□ -1
SPG11-205ENST00000558080 ABCB11O95342 1321 aa8.79□□□□□ -1
SPG11-205ENST00000558080 A0A0U1RQG5 324 aaPredicted RBP8.78□□□□□ -1
SPG11-205ENST00000558080 E7EWF7 191 aa8.78□□□□□ -1
SPG11-205ENST00000558080 ARVCFO00192 962 aa8.78□□□□□ -1
SPG11-205ENST00000558080 IFIT3O14879 490 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 KIAA0355O15063 1070 aa8.78□□□□□ -1
SPG11-205ENST00000558080 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 CDK7P50613 346 aa8.78□□□□□ -1
SPG11-205ENST00000558080 PTSQ03393 145 aa8.78□□□□□ -1
SPG11-205ENST00000558080 FSCN1Q16658 493 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 QRICH1Q2TAL8 776 aa8.78□□□□□ -1
SPG11-205ENST00000558080 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
SPG11-205ENST00000558080 STOX1Q6ZVD7 989 aa8.78□□□□□ -1
SPG11-205ENST00000558080 ANKRD33Q7Z3H0 272 aa8.78□□□□□ -1
SPG11-205ENST00000558080 FBXO11Q86XK2 927 aa8.78□□□□□ -1
SPG11-205ENST00000558080 DEFB123Q8N688 67 aa8.78□□□□□ -1
SPG11-205ENST00000558080 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 NANOS1Q8WY41 292 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 TOX2Q96NM4 488 aa8.78□□□□□ -1
SPG11-205ENST00000558080 TAAR1Q96RJ0 339 aa8.78□□□□□ -1
SPG11-205ENST00000558080 WDR11Q9BZH6 1224 aa8.78□□□□□ -1
SPG11-205ENST00000558080 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
SPG11-205ENST00000558080 RBM19Q9Y4C8 960 aaKnown RBP8.78□□□□□ -1
SPG11-205ENST00000558080 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 ERICH2A1L162 156 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 KLRF2D3W0D1 207 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 SPINT1O43278 529 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 ZEB2O60315 1214 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 EPHB4P54760 987 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 PSMC6P62333 389 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 NKX3-2P78367 333 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 FPGSQ05932 587 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 WTAPQ15007 396 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 DUSP28Q4G0W2 176 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 RALYLQ86SE5 291 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 RGS22Q8NE09 1264 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 DNERQ8NFT8 737 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 NCOA7Q8NI08 942 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 MAP4K1Q92918 833 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 MPHOSPH6Q99547 160 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 MRPL11Q9Y3B7 192 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 Q9Y3F1 56 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 RBM8AQ9Y5S9 174 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 LAMA2P24043 3122 aaKnown RBP8.77□□□□□ -1.01
SPG11-205ENST00000558080 MROH7Q68CQ1 1323 aa8.77□□□□□ -1.01
SPG11-205ENST00000558080 LOC102724159A0A0B4J2E5 919 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms