RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CALCRLQ16602 461 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
NEDD1-213ENST00000557644 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 FARP2O94887 1054 aaPredicted RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 HSDL1Q3SXM5 330 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 SLC5A5Q92911 643 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 MTMR9Q96QG7 549 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 MLXIPQ9HAP2 919 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 XPNPEP3Q9NQH7 507 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 SYNRGQ9UMZ2 1314 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 GH1P01241 217 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 DNM1Q05193 864 aaKnown RBP17.29■□□□□ 0.36
NEDD1-213ENST00000557644 NEDD9Q14511 834 aa17.29■□□□□ 0.36
NEDD1-213ENST00000557644 DOCK5Q9H7D0 1870 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 NKRFO15226 690 aaKnown RBP eCLIP17.28■□□□□ 0.36
NEDD1-213ENST00000557644 BEX3Q00994 111 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 LRCH2Q5VUJ6 765 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 METTL7BQ6UX53 244 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 AFG1LQ8WV93 481 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 SDF4Q9BRK5 362 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 KIAA0100Q14667 2235 aaKnown RBP17.28■□□□□ 0.36
NEDD1-213ENST00000557644 CTAGE5O15320 804 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 MARCH6O60337 910 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 MSCO60682 206 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 GAS7O60861 476 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 PSMD10O75832 226 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 C6orf222P0C671 652 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-213ENST00000557644 TXKP42681 527 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 SPATA33Q96N06 139 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
NEDD1-213ENST00000557644 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
NEDD1-213ENST00000557644 ADAMTS4O75173 837 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 CCNE2O96020 404 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
NEDD1-213ENST00000557644 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 NFASCO94856 1347 aa17.27■□□□□ 0.36
NEDD1-213ENST00000557644 TBX3O15119 743 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 GJB1P08034 283 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 GJA9P57773 515 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 LAMC2Q13753 1193 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 U2AF1L4Q8WU68 220 aaKnown RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 RIT2Q99578 217 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 Q9Y3F1 56 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 CHMP2AO43633 222 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 ATP2C1P98194 919 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 PTPAQ15257 358 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 UPF3AQ9H1J1 476 aaKnown RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 UNC45AQ9H3U1 944 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-213ENST00000557644 VAV3Q9UKW4 847 aa17.26■□□□□ 0.35
NEDD1-213ENST00000557644 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
NEDD1-213ENST00000557644 IL17AQ16552 155 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 FSCN1Q16658 493 aaKnown RBP17.25■□□□□ 0.35
NEDD1-213ENST00000557644 SLFN12Q8IYM2 578 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 ZNF396Q96N95 335 aaPredicted RBP17.25■□□□□ 0.35
NEDD1-213ENST00000557644 TEKT3Q9BXF9 490 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 SGPL1O95470 568 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 LRRC41Q15345 812 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 GNASQ5JWF2 1037 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 GPR20Q99678 358 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 POLR3EQ9NVU0 708 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
NEDD1-213ENST00000557644 A6NJR5 290 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 NOP56O00567 594 aaKnown RBP17.24■□□□□ 0.35
NEDD1-213ENST00000557644 MMP3P08254 477 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 MARCKSP29966 332 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-213ENST00000557644 TECP42680 631 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 ACTR2P61160 394 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 KLHDC9Q8NEP7 349 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 TMEM106CQ9BVX2 250 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 EML1O00423 815 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
NEDD1-213ENST00000557644 GJA8P48165 433 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-213ENST00000557644 LINC00301Q8NCQ3 95 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
NEDD1-213ENST00000557644 POTEMA6NI47 508 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 TFRCP02786 760 aaKnown RBP17.23■□□□□ 0.35
NEDD1-213ENST00000557644 GRIN1Q05586 938 aa17.23■□□□□ 0.35
NEDD1-213ENST00000557644 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms