RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PPTC7Q8NI37 304 aa14.28□□□□□ -0.12
SLIRP-211ENST00000557623 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
SLIRP-211ENST00000557623 GPRASP2Q96D09 838 aa14.28□□□□□ -0.12
SLIRP-211ENST00000557623 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
SLIRP-211ENST00000557623 VPS54Q9P1Q0 977 aa14.28□□□□□ -0.12
SLIRP-211ENST00000557623 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.13
SLIRP-211ENST00000557623 GGPS1O95749 300 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 MMP3P08254 477 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 CLTBP09497 229 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SYN1P17600 705 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 XBP1P17861 261 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 UBA1P22314 1058 aaKnown RBP14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SREBF1P36956 1147 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 CDK7P50613 346 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 NLRP5P59047 1200 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 GALNT17Q6IS24 598 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SPRYD3Q8NCJ5 442 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 WASF1Q92558 559 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SENP7Q9BQF6 1050 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 TMEM260Q9NX78 707 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 LIMCH1Q9UPQ0 1083 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.13
SLIRP-211ENST00000557623 SP2Q02086 613 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 MTMR1Q13613 665 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 RABEP1Q15276 862 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-211ENST00000557623 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 KIF2CQ99661 725 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-211ENST00000557623 MXRA8Q9BRK3 442 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 PRDM5Q9NQX1 630 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-211ENST00000557623 PDLIM7Q9NR12 457 aa14.26□□□□□ -0.13
SLIRP-211ENST00000557623 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
SLIRP-211ENST00000557623 PPFIA4O75335 1185 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 LARGE1O95461 756 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 ITGB5P18084 799 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 ZNF76P36508 570 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 PSMC6P62333 389 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 FAM126BQ8IXS8 530 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 ORC3Q9UBD5 711 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-211ENST00000557623 PCDHA4Q9UN74 947 aa14.25□□□□□ -0.13
SLIRP-211ENST00000557623 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 KIAA0355O15063 1070 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 ST18O60284 1047 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 CYP3A4P08684 503 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 HOXD8P13378 290 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-211ENST00000557623 BMP8BP34820 402 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-211ENST00000557623 FAAP100Q0VG06 881 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 CEP55Q53EZ4 464 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 CYFIP1Q7L576 1253 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 NIPA1Q7RTP0 329 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
SLIRP-211ENST00000557623 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-211ENST00000557623 SORBS3O60504 671 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 CD4P01730 458 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 RAG1P15918 1043 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 KCNA2P16389 499 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-211ENST00000557623 NBPF20Q3BBV1 942 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 NSUN7Q8NE18 718 aaKnown RBP14.23□□□□□ -0.13
SLIRP-211ENST00000557623 GDF15Q99988 308 aa14.23□□□□□ -0.13
SLIRP-211ENST00000557623 TRIM43BA6NCK2 446 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 MEIS1O00470 390 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 F2P00734 622 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 USP11P51784 963 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 SETQ01105 290 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-211ENST00000557623 RASGRP4Q8TDF6 673 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 CRYGNQ8WXF5 182 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 TRIM43Q96BQ3 446 aaPredicted RBP14.22□□□□□ -0.13
SLIRP-211ENST00000557623 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 GPR20Q99678 358 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 SDF4Q9BRK5 362 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 LLPHQ9BRT6 129 aaKnown RBP14.22□□□□□ -0.13
SLIRP-211ENST00000557623 ALG1Q9BT22 464 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 PHF20Q9BVI0 1012 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 KCNH7Q9NS40 1196 aa14.22□□□□□ -0.13
SLIRP-211ENST00000557623 NFASCO94856 1347 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms