RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 STK11IPQ8N1F8 1099 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 BAZ2AQ9UIF9 1905 aaKnown RBP11.2□□□□□ -0.62
NEDD1-211ENST00000557454 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 HAS3O00219 553 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 F2P00734 622 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 GH1P01241 217 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 GNAI3P08754 354 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 EDNRBP24530 442 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 CALML3P27482 149 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 DGKDQ16760 1214 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 LY6KQ17RY6 165 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 NAALADL2Q58DX5 795 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 PPM1JQ5JR12 505 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 CCDC62Q6P9F0 684 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 APBB2Q92870 758 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 ZNF689Q96CS4 500 aaPredicted RBP11.2□□□□□ -0.62
NEDD1-211ENST00000557454 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
NEDD1-211ENST00000557454 ASH1LQ9NR48 2969 aaKnown RBP11.2□□□□□ -0.62
NEDD1-211ENST00000557454 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
NEDD1-211ENST00000557454 SOBPA7XYQ1 873 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 SP9P0CG40 484 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 LMNB2Q03252 620 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 GSE1Q14687 1217 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 LLGL2Q6P1M3 1020 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 SIX5Q8N196 739 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 TDRD5Q8NAT2 981 aaKnown RBP11.19□□□□□ -0.62
NEDD1-211ENST00000557454 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
NEDD1-211ENST00000557454 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
NEDD1-211ENST00000557454 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
NEDD1-211ENST00000557454 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
NEDD1-211ENST00000557454 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 FSD2A1L4K1 749 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
NEDD1-211ENST00000557454 KCTD1Q719H9 257 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 MKL1Q969V6 931 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 MTMR4Q9NYA4 1195 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 FBXL21Q9UKT6 434 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 ANGPTL2Q9UKU9 493 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 PRR12Q9ULL5 1215 aa11.18□□□□□ -0.62
NEDD1-211ENST00000557454 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
NEDD1-211ENST00000557454 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 DGKIO75912 1065 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 ZIC2O95409 532 aaPredicted RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 TTLL1O95922 423 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 ICAM1P05362 532 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 SLC1A4P43007 532 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 KCNC3Q14003 757 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 TTF1Q15361 905 aaPredicted RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 PAN2Q504Q3 1202 aaKnown RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 TMEM184AQ6ZMB5 413 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 RASGRP2Q7LDG7 609 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 DDRGK1Q96HY6 314 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 API5Q9BZZ5 524 aaKnown RBP11.17□□□□□ -0.62
NEDD1-211ENST00000557454 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 USP18Q9UMW8 372 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
NEDD1-211ENST00000557454 STK25O00506 426 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 GNAI2P04899 355 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 MCCP23508 829 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 SPECC1Q5M775 1068 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 SEPT14Q6ZU15 432 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 CMTR2Q8IYT2 770 aaKnown RBP11.16□□□□□ -0.62
NEDD1-211ENST00000557454 ZDHHC14Q8IZN3 488 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 NECTIN4Q96NY8 510 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 IGF2RP11717 2491 aa11.16□□□□□ -0.62
NEDD1-211ENST00000557454 C17orf102A2RUQ5 167 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 GOLIM4O00461 696 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 TREHO43280 583 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 CAND2O75155 1236 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 PRDM1O75626 825 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 SURF6O75683 361 aaKnown RBP11.15□□□□□ -0.62
NEDD1-211ENST00000557454 GHRP10912 638 aa11.15□□□□□ -0.62
NEDD1-211ENST00000557454 HOXB8P17481 243 aaPredicted RBP11.15□□□□□ -0.62
NEDD1-211ENST00000557454 ERVFC1P60507 584 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms