RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 FXR1P51114 621 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS33B-206ENST00000557358 AK2P54819 239 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 ARHGAP4P98171 946 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 SP2Q02086 613 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 SP4Q02446 784 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 PKN1Q16512 942 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 PTGISQ16647 500 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 LRIT3Q3SXY7 679 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 C8orf34Q49A92 452 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 PSRC1Q6PGN9 363 aaPredicted RBP15.74■□□□□ 0.11
VPS33B-206ENST00000557358 SESTD1Q86VW0 696 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 IL17RAQ96F46 866 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 TRMT13Q9NUP7 481 aaKnown RBP15.74■□□□□ 0.11
VPS33B-206ENST00000557358 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
VPS33B-206ENST00000557358 KAT6AQ92794 2004 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 H3BRB1 525 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 PPFIA3O75145 1194 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 ITGB5P18084 799 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 CLK2P49760 499 aaKnown RBP15.73■□□□□ 0.11
VPS33B-206ENST00000557358 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-206ENST00000557358 NIPA1Q7RTP0 329 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 CAGE1Q8TC20 777 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 SEPT1Q8WYJ6 367 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 PGBD1Q96JS3 809 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 RNPC3Q96LT9 517 aaKnown RBP15.73■□□□□ 0.11
VPS33B-206ENST00000557358 TUT1Q9H6E5 874 aaKnown RBP15.73■□□□□ 0.11
VPS33B-206ENST00000557358 AZI2Q9H6S1 392 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 JPH1Q9HDC5 661 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-206ENST00000557358 TMEM260Q9NX78 707 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 TPCN1Q9ULQ1 816 aa15.73■□□□□ 0.11
VPS33B-206ENST00000557358 STK36Q9NRP7 1315 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 LGALS2P05162 132 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 PFKMP08237 780 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 CYP2C18P33260 490 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 SCRN1Q12765 414 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 SEMA3FQ13275 785 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 UTP14CQ5TAP6 766 aaKnown RBP15.72■□□□□ 0.11
VPS33B-206ENST00000557358 IL27Q8NEV9 243 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 KAT2BQ92831 832 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 GLG1Q92896 1179 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 GPR20Q99678 358 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 NOC4LQ9BVI4 516 aaKnown RBP15.72■□□□□ 0.11
VPS33B-206ENST00000557358 BRMS1Q9HCU9 246 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 PKD2L1Q9P0L9 805 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 HDAC6Q9UBN7 1215 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 GTF2IRD1Q9UHL9 959 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 PCDHA4Q9UN74 947 aa15.72■□□□□ 0.11
VPS33B-206ENST00000557358 NFASCO94856 1347 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 C17orf102A2RUQ5 167 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 PARNO95453 639 aaKnown RBP15.71■□□□□ 0.11
VPS33B-206ENST00000557358 SEC24BO95487 1268 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 CYP3A4P08684 503 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 CYP2C9P11712 490 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 KCNA2P16389 499 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 ITGB8P26012 769 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 RFC2P35250 354 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 CCL23P55773 120 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 TRIM29Q14134 588 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 SMARCAD1Q9H4L7 1026 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 IL23AQ9NPF7 189 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 ORC3Q9UBD5 711 aaPredicted RBP15.71■□□□□ 0.11
VPS33B-206ENST00000557358 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
VPS33B-206ENST00000557358 HAS3O00219 553 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 MEIS1O00470 390 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 ACTN1P12814 892 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 CSF2RAP15509 400 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 TCF7P36402 384 aaPredicted RBP15.7■□□□□ 0.1
VPS33B-206ENST00000557358 SHHQ15465 462 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 GPR153Q6NV75 609 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 BLIDQ8IZY5 108 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 AFAP1L1Q8TED9 768 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 C16orf70Q9BSU1 422 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 ERAP1Q9NZ08 941 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
VPS33B-206ENST00000557358 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 CCDC194A0A1B0GVG4 234 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 ST18O60284 1047 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 ATP9AO75110 1047 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 FGBP02675 491 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 USP11P51784 963 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 PTK7Q13308 1070 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-206ENST00000557358 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 ATP6V0A1Q93050 837 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 ZSCAN31Q96LW9 406 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-206ENST00000557358 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 AGO4Q9HCK5 861 aaKnown RBP15.69■□□□□ 0.1
VPS33B-206ENST00000557358 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
VPS33B-206ENST00000557358 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
VPS33B-206ENST00000557358 SMIM10L2AP0DMW4 78 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 SMIM10L2BP0DMW5 78 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 NONOQ15233 471 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS33B-206ENST00000557358 PRR16Q569H4 304 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 C9orf50Q5SZB4 431 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
VPS33B-206ENST00000557358 DAGLBQ8NCG7 672 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms